RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 OR13C3Q8NGS6 347 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 TMEM239Q8WW34 195 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 RAB40AQ8WXH6 277 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 OR52D1Q9H346 318 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 KLHL42Q9P2K6 505 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 OR6C65A6NJZ3 312 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 GAPDHSO14556 408 aaPredicted RBP14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 EGFP01133 1207 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 HMGN2P05204 90 aaKnown RBP14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 CLUP10909 449 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 GNRHRP30968 328 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 S100A11P31949 105 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 TGM4P49221 684 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 GZMKP49863 264 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 BEX5Q5H9J7 111 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 C18orf63Q68DL7 685 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 IDO2Q6ZQW0 420 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 FAM83HQ6ZRV2 1179 aaPredicted RBP14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 RNF175Q8N4F7 328 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 LRIG1Q96JA1 1093 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 HIF3AQ9Y2N7 669 aa14.87□□□□□ -0.03
RBFOX1-212ENST00000550418 MEIS3P1A6NDR6 274 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 SNRPBP14678 240 aaKnown RBP14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 PSMB10P40306 273 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 SGSHP51688 502 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 IL13RA1P78552 427 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 DEFA6Q01524 100 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 HTR4Q13639 388 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 APCDD1Q8J025 514 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 HAVCR2Q8TDQ0 301 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 ALOXE3Q9BYJ1 711 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 CLEC2DQ9UHP7 191 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 A0A0A6YYH2 397 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 A6NJ64 397 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 VEGFDO43915 354 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 SNRNP70P08621 437 aaKnown RBP14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 TGFBR1P36897 503 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 PIP5KL1Q5T9C9 394 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 TSSK4Q6SA08 328 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 PGAP1Q75T13 922 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 SLC29A4Q7RTT9 530 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 TRIM46Q7Z4K8 759 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 ZNF283Q8N7M2 679 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 PLA2G15Q8NCC3 412 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 STK35Q8TDR2 534 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 HRH4Q9H3N8 390 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 LTB4R2Q9NPC1 389 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 ZNF226Q9NYT6 803 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 MYADML2A6NDP7 307 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 HOXC11O43248 304 aaPredicted RBP14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 GPX2P18283 190 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 RAB3AP20336 220 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 FCRLAQ7L513 359 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 SIAH3Q8IW03 269 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 GPR26Q8NDV2 337 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 DOK4Q8TEW6 326 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 TM9SF4Q92544 642 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 SMIM14Q96QK8 99 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 GPR62Q9BZJ7 368 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 USP3Q9Y6I4 520 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 TSTD3H0UI37 97 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 PIM1P11309 404 aaPredicted RBP14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 CCR7P32248 378 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 NUDT1P36639 197 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 MTNR1BP49286 362 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 CXADRP78310 365 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 PEA15Q15121 130 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 RAB11FIP2Q7L804 512 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 OR4N5Q8IXE1 308 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 NAXEQ8NCW5 288 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 OR5H2Q8NGV7 314 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 DUSP19Q8WTR2 217 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 ZNF566Q969W8 418 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 ZNF587Q96SQ5 575 aaPredicted RBP14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 CDC6Q99741 560 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 SLC38A1Q9H2H9 487 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 EGLN3Q9H6Z9 239 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 CYP8B1Q9UNU6 501 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 PRSS21Q9Y6M0 314 aa14.86□□□□□ -0.03
RBFOX1-212ENST00000550418 TRDV1A0A1B0GX56 115 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 HCRTR2O43614 444 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 FADS1O60427 444 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 BDKRB2P30411 391 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 ALDH3B1P43353 468 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 TAS2R31P59538 309 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 DUSP6Q16828 381 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 XKR7Q5GH72 579 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 SFXN4Q6P4A7 337 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 OR6N1Q8NGY5 312 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 FOXRED1Q96CU9 486 aaPredicted RBP14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 PRRT1Q99946 306 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 VRK1Q99986 396 aaPredicted RBP14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 MYH9P35579 1960 aaKnown RBP14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 KNL1Q8NG31 2342 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 NPIPB15A6NHN6 443 aaPredicted RBP14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 DRGXA6NNA5 263 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 FXYD1O00168 92 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 IFNA1P01562 189 aa14.85□□□□□ -0.03
RBFOX1-212ENST00000550418 PTBP1P26599 531 aaKnown RBP eCLIP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms