RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 MBLAC2Q68D91 279 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 OR8G2PQ6IF36 304 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 FAM199XQ6PEV8 388 aaPredicted RBP8.33□□□□□ -1.08
VPS13D-212ENST00000543766 H1FNTQ75WM6 255 aaPredicted RBP8.33□□□□□ -1.08
VPS13D-212ENST00000543766 SLC16A14Q7RTX9 510 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 WDFY1Q8IWB7 410 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 GDPD1Q8N9F7 314 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM116Q8NCL8 245 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 ZMIZ2Q8NF64 920 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 OR14A16Q8NHC5 309 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM174Q8WUU8 243 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 ASB10Q8WXI3 467 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 PERPQ96FX8 193 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 SLC41A2Q96JW4 573 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 SORT1Q99523 831 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 MRIQ9BWK5 157 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 CDCP1Q9H5V8 836 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 ZMAT3Q9HA38 289 aaKnown RBP8.33□□□□□ -1.08
VPS13D-212ENST00000543766 USP3Q9Y6I4 520 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 OR52A4PA6NMU1 304 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 SERPINA5P05154 406 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 MYL9P24844 172 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 GYG1P46976 350 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 MRPL19P49406 292 aaKnown RBP8.33□□□□□ -1.08
VPS13D-212ENST00000543766 PRELPP51888 382 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 CDH8P55286 799 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 MRPL21Q7Z2W9 205 aaKnown RBP8.33□□□□□ -1.08
VPS13D-212ENST00000543766 FAM71AQ8IYT1 594 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 MITD1Q8WV92 249 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 BOD1Q96IK1 185 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 PIWIL1Q96J94 861 aaKnown RBP8.33□□□□□ -1.08
VPS13D-212ENST00000543766 POM121L2Q96KW2 1035 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 COQ10AQ96MF6 247 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 SLC38A3Q99624 504 aa8.33□□□□□ -1.08
VPS13D-212ENST00000543766 YTHDF1Q9BYJ9 559 aaKnown RBP8.33□□□□□ -1.08
VPS13D-212ENST00000543766 MSH4O15457 936 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 LEFTY1O75610 366 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 GLB1P16278 677 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM33P57088 247 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 OR2B8PP59922 312 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 RPS8P62241 208 aaKnown RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 PPP2CBP62714 309 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 PPP2CAP67775 309 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 SPDYE7PQ495Y7 208 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 PRAMEF8Q5VWM4 474 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 PRAMEF7Q5VXH5 474 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 LCLAT1Q6UWP7 414 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ZNF620Q6ZNG0 422 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 CLEC1AQ8NC01 280 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 PROKR2Q8NFJ6 384 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 OR51S1Q8NGJ8 323 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ABHD17AQ96GS6 310 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM169Q96HH4 297 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ZNF354BQ96LW1 612 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 SRSF8Q9BRL6 282 aaKnown RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 AARSD1Q9BTE6 412 aaKnown RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 OR10A5Q9H207 317 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 MED20Q9H944 212 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 TRBV7-9A0A0J9YWB2 115 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 TBC1D3FA6NER0 549 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 HCN1O60741 890 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 TCRBP04435 133 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 IQCF3P0C7M6 154 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 HOXA13P31271 388 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ARRB2P32121 409 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 PTPN7P35236 360 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 POLR2IP36954 125 aaKnown RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 OSTNP61366 133 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 CD47Q08722 323 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 SLC10A2Q12908 348 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 CAMK2GQ13555 558 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 SOWAHCQ53LP3 525 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ZNF529Q6P280 563 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 LDB1Q86U70 411 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 MRPL38Q96DV4 380 aaKnown RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 CMKLR1Q99788 373 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 CRISPLD1Q9H336 500 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 IMP3Q9NV31 184 aaKnown RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ZDHHC3Q9NYG2 299 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 CDYLQ9Y232 598 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ANKRD31Q8N7Z5 1873 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 TBC1D3KA0A087X1G2 549 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 EFCAB9A8MZ26 197 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 SEC14L6B5MCN3 397 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 C1QTNF3-AMACRE9PGA6 284 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 M0R233 179 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 IFNA5P01569 189 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 FGF3P11487 239 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 MAKP20794 623 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ST3GAL4Q11206 333 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 TRAF3Q13114 568 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 LDLRAD2Q5SZI1 272 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 XAF1Q6GPH4 301 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 SLC47A2Q86VL8 602 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 APCDD1Q8J025 514 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 PACRGLQ8N7B6 248 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 ZSCAN4Q8NAM6 433 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-212ENST00000543766 HSD17B11Q8NBQ5 300 aa8.32□□□□□ -1.08
VPS13D-212ENST00000543766 CHST14Q8NCH0 376 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms