RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 NR4A3Q92570 626 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 NODALQ96S42 347 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 KLHDC3Q9BQ90 382 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 ZNF559Q9BR84 538 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 FNDC11Q9BVV2 318 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 OSBPL11Q9BXB4 747 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 ARMC7Q9H6L4 198 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 ZBTB20Q9HC78 741 aaPredicted RBP12.17□□□□□ -0.46
CHFR-221ENST00000542714 P4HTMQ9NXG6 502 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 TESQ9UGI8 421 aaKnown RBP12.17□□□□□ -0.46
CHFR-221ENST00000542714 SLC35A3Q9Y2D2 325 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 CEP250Q9BV73 2442 aa12.17□□□□□ -0.46
CHFR-221ENST00000542714 AHCTF1Q8WYP5 2266 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 A0A1W2PQD3 144 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 SH3PXD2BA1X283 911 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 ALG1L2C9J202 215 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 FAAHO00519 579 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 SCDO00767 359 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 DENRO43583 198 aaKnown RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 CYP7B1O75881 506 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 CCNB2O95067 398 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 FBXO45P0C2W1 286 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 UBTFL6P0CB48 400 aaPredicted RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 NAGAP17050 411 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 IGFBP5P24593 272 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 ARHGDIAP52565 204 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 SMIM11AP58511 58 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 ADARB1P78563 741 aaKnown RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHFR-221ENST00000542714 EPS8Q12929 822 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 CHAF1BQ13112 559 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 ATP1A4Q13733 1029 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 EFR3AQ14156 821 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 TGIF1Q15583 401 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 OR1Q1Q15612 314 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 ZIK1Q3SY52 487 aaPredicted RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 MARCH3Q86UD3 253 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 CHERPQ8IWX8 916 aaKnown RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 ARMC10Q8N2F6 343 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 PHOSPHO1Q8TCT1 267 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 ADAMTS16Q8TE57 1224 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 TFAP2CQ92754 450 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 NACC2Q96BF6 587 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 SLC41A3Q96GZ6 507 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 NAF1Q96HR8 494 aaKnown RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 RASL10BQ96S79 203 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 FEVQ99581 238 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 PRSS27Q9BQR3 290 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 ADI1Q9BV57 179 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 POLR2J2Q9GZM3 115 aaKnown RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 POLR2J3Q9H1A7 115 aaKnown RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 TOR3AQ9H497 397 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
CHFR-221ENST00000542714 LRCH1Q9Y2L9 728 aa12.16□□□□□ -0.46
CHFR-221ENST00000542714 A0A087WUU8 490 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 DCDC2BA2VCK2 349 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 TRAPPC13A5PLN9 417 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 UBL4AP11441 157 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 LIFP15018 202 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 EVI2BP34910 448 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 ZNF117Q03924 483 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 MERTKQ12866 999 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 RTP5Q14D33 572 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 TRAM2Q15035 370 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 SLC36A3Q495N2 470 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 DCST1Q5T197 706 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 FCRLBQ6BAA4 426 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 WDR88Q6ZMY6 472 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 ZNF550Q7Z398 422 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 GALNT5Q7Z7M9 940 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 RAB43Q86YS6 212 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 NKAIN4Q8IVV8 208 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 ZNF440Q8IYI8 595 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 SLC15A4Q8N697 577 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 IL22RA1Q8N6P7 574 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 ATG16L2Q8NAA4 619 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 OR5M3Q8NGP4 307 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 SLC22A8Q8TCC7 542 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 GRHL3Q8TE85 626 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 RDH12Q96NR8 316 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 NIPSNAP1Q9BPW8 284 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 ANKRD19PQ9H560 264 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 TMCC3Q9ULS5 477 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 SLC7A7Q9UM01 511 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 HRH3Q9Y5N1 445 aa12.15□□□□□ -0.46
CHFR-221ENST00000542714 A0A0B4J2E0 115 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 A0A1B0GWA3 101 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 A0A1B0GX12 115 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 E9PQ18 207 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 SCO2O43819 266 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 ITGA10O75578 1167 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 GASTP01350 101 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 GNAO1P09471 354 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 LIPCP11150 499 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 ANXA8P13928 327 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 HPGDP15428 266 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 POLR2IP36954 125 aaKnown RBP12.14□□□□□ -0.47
CHFR-221ENST00000542714 CAPGP40121 348 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 PTGDSP41222 190 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 SOX3P41225 446 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms