RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 VWA5B2Q8N398 1253 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 D2HGDHQ8N465 521 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 FAM86B1Q8N7N1 296 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 AMER3Q8N944 861 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 OR10G2Q8NGC3 310 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 IPCEF1Q8WWN9 437 aaPredicted RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 KLHL6Q8WZ60 621 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 RIT1Q92963 219 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 SLC38A4Q969I6 547 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 SLC41A2Q96JW4 573 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 Q96MT0 163 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 FCRL4Q96PJ5 515 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 NRTNQ99748 197 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 MACROD1Q9BQ69 325 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 TUBA1CQ9BQE3 449 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 FNDC11Q9BVV2 318 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 TOR3AQ9H497 397 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 ZNF552Q9H707 407 aaPredicted RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 SH3GLB1Q9Y371 365 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 HCFC1P51610 2035 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 CCDC88CQ9P219 2028 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 SONP18583 2426 aaKnown RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 INTS1Q8N201 2190 aaKnown RBP7.71□□□□□ -1.17
CHD4-208ENST00000540960 CHD3Q12873 2000 aaKnown RBP7.71□□□□□ -1.17
CHD4-208ENST00000540960 SNTNA6NMZ2 147 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 SGK494L7N484 410 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 BCKDKO14874 412 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 PCDH17O14917 1159 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 FMO6PO60774 539 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 NOL3O60936 208 aaKnown RBP7.71□□□□□ -1.18
CHD4-208ENST00000540960 CLDN14O95500 239 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 SNAP29O95721 258 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 LGI1O95970 557 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 MT-ND1P03886 318 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 CD63P08962 238 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 PABPC4LP0CB38 370 aaKnown RBP7.71□□□□□ -1.18
CHD4-208ENST00000540960 CD247P20963 164 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 STT3AP46977 705 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 MAN2A2P49641 1150 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 POU6F2P78424 691 aaPredicted RBP7.71□□□□□ -1.18
CHD4-208ENST00000540960 VLDLRP98155 873 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 RUNX1T1Q06455 604 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 ST3GAL3Q11203 375 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 DUSP8Q13202 625 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 DSG2Q14126 1118 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 PRSS53Q2L4Q9 553 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 ZNF440Q8IYI8 595 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 OFCC1Q8IZS5 231 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 ZNF619Q8N2I2 560 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 SLC43A2Q8N370 569 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 COX18Q8N8Q8 333 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 OR9A4Q8NGU2 314 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 OR52P1PQ8NH57 321 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 TRUB1Q8WWH5 349 aaKnown RBP7.71□□□□□ -1.18
CHD4-208ENST00000540960 RAB8BQ92930 207 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 CTHRC1Q96CG8 243 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 DGCR14Q96DF8 476 aaKnown RBP7.71□□□□□ -1.18
CHD4-208ENST00000540960 MMABQ96EY8 250 aaPredicted RBP7.71□□□□□ -1.18
CHD4-208ENST00000540960 PRRC1Q96M27 445 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 ALPK1Q96QP1 1244 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 OR6C1Q96RD1 312 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 GABARAPL3Q9BY60 117 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 SLC7A5P2Q9GIP4 190 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 KLHL25Q9H0H3 589 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 Q9N2J8 555 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 FAM60AQ9NP50 221 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 MKKSQ9NPJ1 570 aaPredicted RBP7.71□□□□□ -1.18
CHD4-208ENST00000540960 CUTCQ9NTM9 273 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 ABCG2Q9UNQ0 655 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 FARSAQ9Y285 508 aaKnown RBP7.71□□□□□ -1.18
CHD4-208ENST00000540960 WDR45Q9Y484 360 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 GMPPBQ9Y5P6 360 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 SNX5Q9Y5X3 404 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 LYVE1Q9Y5Y7 322 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 DOCK10Q96BY6 2186 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 PCM1Q15154 2024 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 NBEAL2Q6ZNJ1 2754 aa7.71□□□□□ -1.18
CHD4-208ENST00000540960 A0A0A6YYC8 382 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 A0A1B0GX78 115 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 C4orf51C9J302 202 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 I3L1I5 382 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 ZNF701M0R085 212 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 DSCR3O14972 297 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 RDH16O75452 317 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 GCM2O75603 506 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 NKX2-2O95096 273 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 OR5F1O95221 314 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 F12P00748 615 aaPredicted RBP7.7□□□□□ -1.18
CHD4-208ENST00000540960 STATHP02808 62 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 C8orf89P0DMQ9 161 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 IL7RP16871 459 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 TNNI3P19429 210 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 KRT20P35900 424 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 CA7P43166 264 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 GABRA4P48169 554 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 HLCSP50747 726 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 TDGF1P3P51864 188 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 UGT2B15P54855 530 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 CDH12P55289 794 aa7.7□□□□□ -1.18
CHD4-208ENST00000540960 CDC42P60953 191 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms