RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 GPR50Q13585 617 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 COL19A1Q14993 1142 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 FHL5Q5TD97 284 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 VASNQ6EMK4 673 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF517Q6ZMY9 492 aaPredicted RBP10.69□□□□□ -0.7
C11orf54-214ENST00000540113 UBQLNLQ8IYU4 475 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 COX18Q8N8Q8 333 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 OR13C2Q8NGS9 318 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 TMCO6Q96DC7 493 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 WDFY2Q96P53 400 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 C11orf54Q9H0W9 315 aaPredicted RBP10.69□□□□□ -0.7
C11orf54-214ENST00000540113 MAT2BQ9NZL9 334 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 NTMQ9P121 344 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 USP36Q9P275 1121 aaKnown RBP10.69□□□□□ -0.7
C11orf54-214ENST00000540113 TNFRSF10DQ9UBN6 386 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 NDRG2Q9UN36 371 aaKnown RBP10.69□□□□□ -0.7
C11orf54-214ENST00000540113 CDH10Q9Y6N8 788 aa10.69□□□□□ -0.7
C11orf54-214ENST00000540113 MN1Q10571 1320 aaPredicted RBP10.69□□□□□ -0.7
C11orf54-214ENST00000540113 UNC119BA6NIH7 251 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 GABRPO00591 440 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 RFPL3O75679 317 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 IGHV4-34P06331 123 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 TYRP1P17643 537 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 HTR3AP46098 478 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 C1orf61Q13536 156 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 KRR1Q13601 381 aaKnown RBP10.68□□□□□ -0.7
C11orf54-214ENST00000540113 PDZK1Q5T2W1 519 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 DDI2Q5TDH0 399 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 USP53Q70EK8 1073 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 KLHL36Q8N4N3 616 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 CLDN22Q8N7P3 220 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 CYB561A3Q8NBI2 242 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 OR51A7Q8NH64 312 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 FANK1Q8TC84 345 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 HMGB4Q8WW32 186 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 SENP5Q96HI0 755 aaPredicted RBP10.68□□□□□ -0.7
C11orf54-214ENST00000540113 PTCHD1Q96NR3 888 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 BEX2Q9BXY8 128 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 PRO3102Q9H379 93 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 CACYBPQ9HB71 228 aaKnown RBP10.68□□□□□ -0.7
C11orf54-214ENST00000540113 NEK6Q9HC98 313 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 NLGN3Q9NZ94 848 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 FBXL4Q9UKA2 621 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 MTCH2Q9Y6C9 303 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 A6NL46 340 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 C12orf71A8MTZ7 269 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 CDC123O75794 336 aaPredicted RBP10.68□□□□□ -0.7
C11orf54-214ENST00000540113 SEMA4FO95754 770 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 GYPBP06028 91 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 NOS3P29474 1203 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 AKT2P31751 481 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 YPEL5P62699 121 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 IFITM2Q01629 132 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 DUSP8Q13202 625 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 DSG2Q14126 1118 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 ATAD3CQ5T2N8 411 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 TMEM53Q6P2H8 277 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 GJD3Q8N144 294 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF619Q8N2I2 560 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 SMRP1Q8NCR6 262 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 OR4N2Q8NGD1 307 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 NEIL3Q8TAT5 605 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 RFKQ969G6 155 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 TP53INP1Q96A56 240 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 RERGQ96A58 199 aaPredicted RBP10.68□□□□□ -0.7
C11orf54-214ENST00000540113 NECTIN4Q96NY8 510 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 ZFYVE21Q9BQ24 234 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF350Q9GZX5 532 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 OR51V1Q9H2C8 321 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 PIGUQ9H490 435 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 HRASLS2Q9NWW9 162 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 SIDT1Q9NXL6 827 aaKnown RBP10.68□□□□□ -0.7
C11orf54-214ENST00000540113 C19orf53Q9UNZ5 99 aaPredicted RBP10.68□□□□□ -0.7
C11orf54-214ENST00000540113 GSTK1Q9Y2Q3 226 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 PCDHGB2Q9Y5G2 931 aa10.68□□□□□ -0.7
C11orf54-214ENST00000540113 A0A1B0GVC2 190 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 TRAPPC13A5PLN9 417 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 A6NIN4 97 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 E9PI62 339 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 HRKO00198 91 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 POLR1CO15160 346 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 PRKNO60260 465 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ADAM11O75078 769 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 STX11O75558 287 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 POU3F3P20264 500 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 HTR1FP30939 366 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 HOXD12P35452 270 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 RPS7P62081 194 aaKnown RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 UBE2IP63279 158 aaKnown RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 FAM27D1Q5T7N8 215 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 CNIH2Q6PI25 160 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF322Q6U7Q0 402 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 IL20RBQ6UXL0 311 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 TMEM91Q6ZNR0 172 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ABHD13Q7L211 337 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 RANBP3LQ86VV4 465 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 RAB43Q86YS6 212 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ARIH2OSQ8N7S6 290 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 TMEM239Q8WW34 195 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ATF6BQ99941 703 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms