RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 P2RX1P51575 399 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 CLDN18P56856 261 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 SRYQ05066 204 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 CDSNQ15517 529 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 MAPK14Q16539 360 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 RAET1LQ5VY80 246 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 NSUN5P2Q63ZY6 315 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 CBLN3Q6UW01 205 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 LRRC74BQ6ZQY2 392 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 SEM1Q6ZVN7 128 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 MSRB3Q8IXL7 192 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF619Q8N2I2 560 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF614Q8N883 585 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 OR5M1Q8NGP8 315 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 OR10Q1Q8NGQ4 319 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 TSPEARQ8WU66 669 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 ASB5Q8WWX0 329 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 SDCCAG3Q96C92 435 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 ZG16BQ96DA0 208 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 AURKBQ96GD4 344 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 MTHFD2LQ9H903 347 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 CALHM2Q9HA72 323 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 MED17Q9NVC6 651 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 THUMPD1Q9NXG2 353 aaKnown RBP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 SLC25A37Q9NYZ2 338 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 SLAMF8Q9P0V8 285 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 KLHL14Q9P2G3 628 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 VDAC3Q9Y277 283 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 KLF2Q9Y5W3 355 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 TRBV5-3A0A0A0MS03 114 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 CENPVL1A0A0U1RR11 272 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 C7orf72A4D263 438 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 CD8B2A6NJW9 211 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 SHISA8B8ZZ34 492 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 FAM47E-STBD1D6RA91 191 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 DYNC1I1O14576 645 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 ZNF264O43296 627 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 TOXO94900 526 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 CLDN14O95500 239 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 TFPTP0C1Z6 253 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 LINGO3P0C6S8 592 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 NR2F1P10589 423 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 CHRNB4P30926 498 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 TIMP3P35625 211 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 ZNF41P51814 821 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 SUMO3P55854 103 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 DSTNP60981 165 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 HPCAP84074 193 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 RGNQ15493 299 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 MAPK11Q15759 364 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 PLPPR5Q32ZL2 321 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 NDUFAF6Q330K2 333 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 RIPPLY2Q5TAB7 128 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 EIF3MQ7L2H7 374 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 ADGRE4PQ86SQ3 457 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 LACC1Q8IV20 430 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 CCDC71Q8IV32 467 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 GTPBP8Q8N3Z3 284 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 LILRB4Q8NHJ6 448 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 GPR119Q8TDV5 335 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 CA5BP1Q8WTZ4 195 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 PMM1Q92871 262 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 ZBTB8AQ96BR9 441 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 TRIB1Q96RU8 372 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 NPAS1Q99742 590 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 TUBA1CQ9BQE3 449 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 LAT2Q9GZY6 243 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 SLC38A1Q9H2H9 487 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 RAD21L1Q9H4I0 556 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 RUBCNLQ9H714 662 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 MRGBPQ9NV56 204 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 VAPAQ9P0L0 249 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 P2RX2Q9UBL9 471 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 LEF1Q9UJU2 399 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 NDUFAF1Q9Y375 327 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 GMEB1Q9Y692 573 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 AP4B1Q9Y6B7 739 aa11.45□□□□□ -0.58
CCDC90B-216ENST00000529856 HEATR5AQ86XA9 2040 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 A0A0G2JNJ9 132 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 AGAP5A6NIR3 686 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 PRSS44E7EML9 344 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 H0Y3Z8 333 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 DNAJA2O60884 412 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 CSTAP01040 98 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 SNRPB2P08579 225 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 UBL4AP11441 157 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 BMP2P12643 396 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 ZNF17P17021 662 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 POU3F2P20265 443 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 PPIBP23284 216 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 PSMA4P25789 261 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 COL8A1P27658 744 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 HTR1EP28566 365 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 CEACAM8P31997 349 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 PGM1P36871 562 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 EIF1P41567 113 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 CLDN15P56746 228 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 KCNJ10P78508 379 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms