RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CEP250Q9BV73 2442 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 A0A087WUU8 490 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 CDHR4A6H8M9 788 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 AP3D1O14617 1153 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 RAD1O60671 282 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 BCAS1O75363 584 aaPredicted RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 NTN1O95631 604 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 DDAH2O95865 285 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 UMODP07911 640 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 IGFBP1P08833 259 aaPredicted RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 JUNBP17275 347 aaPredicted RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 GABRB1P18505 474 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 MMP11P24347 488 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 KRT20P35900 424 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 RNF144AP50876 292 aaPredicted RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 PLAURQ03405 335 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 ST3GAL3Q11203 375 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 TRAM2Q15035 370 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 NNATQ16517 81 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 ZBED5Q49AG3 693 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 TMEM236Q5W0B7 351 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 XAF1Q6GPH4 301 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 C1orf94Q6P1W5 598 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 CD300LDQ6UXZ3 194 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 CPEB2Q7Z5Q1 589 aaKnown RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 GPA33Q99795 319 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 POLR2J3Q9H1A7 115 aaKnown RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 C19orf25Q9UFG5 118 aaPredicted RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 WDFY3Q8IZQ1 3526 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 CNOT1A5YKK6 2376 aaKnown RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 SYNDIG1LA6NDD5 238 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 PRG2P13727 222 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 DLSTP36957 453 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 IDH2P48735 452 aaKnown RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 RPS15P62841 145 aaKnown RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 SLC35A2P78381 396 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 NEDD8Q15843 81 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 FLYWCH1Q4VC44 716 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 PAPD4Q6PIY7 484 aaKnown RBP13.35□□□□□ -0.27
CLN8-204ENST00000519254 PLEKHM3Q6ZWE6 761 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 GDF7Q7Z4P5 450 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 GPR141Q7Z602 305 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 CCDC103Q8IW40 242 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 ZSCAN1Q8NBB4 408 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 ZNF721Q8TF20 911 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 SLC38A4Q969I6 547 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 ART5Q96L15 291 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 RHNO1Q9BSD3 238 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 NUDT9Q9BW91 350 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 ITPAQ9BY32 194 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 ANKRD19PQ9H560 264 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 COPS7AQ9UBW8 275 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 TCFL5Q9UL49 500 aa13.35□□□□□ -0.27
CLN8-204ENST00000519254 KNTC1P50748 2209 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 HEATR5AQ86XA9 2040 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 SAGE2PA6NJ88 616 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 PRKNO60260 465 aaPredicted RBP13.34□□□□□ -0.27
CLN8-204ENST00000519254 OR5F1O95221 314 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 SOX14O95416 240 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 GKN3PP0CG01 181 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 POU1F1P28069 291 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 STAT5AP42229 794 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 RFX3P48380 749 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 SLC37A1P57057 533 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 DNASE1L3Q13609 305 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 RAB39AQ14964 217 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 PDZK1Q5T2W1 519 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 TMEM205Q6UW68 189 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 NKAIN4Q8IVV8 208 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 OR7G1Q8NGA0 311 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 SLC41A3Q96GZ6 507 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 GAL3ST4Q96RP7 486 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 NODALQ96S42 347 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 LPAR4Q99677 370 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 B3GNT4Q9C0J1 378 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 ERVK-18Q9QC07 812 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 FARSAQ9Y285 508 aaKnown RBP13.34□□□□□ -0.27
CLN8-204ENST00000519254 TPRKBQ9Y3C4 175 aa13.34□□□□□ -0.27
CLN8-204ENST00000519254 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 NPIPB9F8W1W9 429 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 M0R129 80 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 IGKV3-11P04433 115 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 CD63P08962 238 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 RAB40ALP0C0E4 278 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 SDHBP21912 280 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 DRD5P21918 477 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 PCMT1P22061 227 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 HTR2AP28223 471 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 OTX2P32243 289 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 ALDH6A1Q02252 535 aaKnown RBP13.33□□□□□ -0.28
CLN8-204ENST00000519254 COX10Q12887 443 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 FOXC1Q12948 553 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 DECR1Q16698 335 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 PRICKLE2Q7Z3G6 844 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 DEPDC4Q8N2C3 294 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 OR1N1Q8NGS0 311 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 Q9N2J8 555 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 ASCL3Q9NQ33 180 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms