RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 C16orf97H3BN30 126 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 BLOC1S5-TXNDC5H3BN57 136 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 H7C0C1 242 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GOLGA8RI6L899 631 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 J3KR12 359 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 M0R3G1 203 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DLGAP1O14490 977 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYB561D2O14569 222 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DYNC1I1O14576 645 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TOR1AO14656 332 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 EI24O14681 340 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ITGB1BP1O14713 200 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IMPA2O14732 288 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SH2D1BO14796 132 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 AIM2O14862 343 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LIN7AO14910 233 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB29O14966 203 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NACADO15069 1562 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 EPHB6O15197 1021 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAD51BO15315 384 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GRIN2DO15399 1336 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MSH4O15457 936 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TAPBPO15533 448 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 P2RX6O15547 441 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNHIT1O43257 154 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPAA1O43292 621 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LDB2O43679 373 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRKAB2O43741 272 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 KIAA0513O60268 411 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADCY9O60503 1353 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LMX1BO60663 402 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 HUS1O60921 280 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 WDR1O75083 606 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NDUFS7O75251 213 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRCH4O75427 683 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 HSBP1O75506 76 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRKRAO75569 313 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 UGT2B17O75795 530 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZMPSTE24O75844 475 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBBP9O75884 186 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATP5HO75947 161 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDK2AP2O75956 126 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2J3O76001 311 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PDE5AO76074 875 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 WISP2O76076 250 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 B3GAT3O94766 335 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TOXO94900 526 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SOX30O94993 753 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RPP14O95059 124 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCNB2O95067 398 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NXPH2O95156 264 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5F1O95221 314 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRATO95237 230 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 VAPBO95292 243 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FARS2O95363 451 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LCA5LO95447 670 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ETHE1O95571 254 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PAK4O96013 591 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGLV2-11P01706 119 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PIGRP01833 764 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGHG3P01860 377 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 HLA-HP01893 362 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NR3C1P04150 777 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RPN2P04844 631 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGF1P05019 195 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ALDOBP05062 364 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GLAP06280 429 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SERPINE2P07093 398 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SP1P08047 785 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 HBQ1P09105 142 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ALOX5P09917 674 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 UBCP0CG48 685 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM106CPP0CH98 169 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 BCKDHAP12694 445 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNH1P13489 461 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATP1B2P14415 290 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DARSP14868 501 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ETS2P15036 469 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYP11B1P15538 503 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NQO2P16083 231 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NCK1P16333 377 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CHRNB2P17787 502 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TCN1P20061 433 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PGCP20142 388 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 KITLGP21583 273 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 BGNP21810 368 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PCMT1P22061 227 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPX3P22352 226 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CA4P22748 312 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TUBG1P23258 451 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GLRA1P23415 457 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MSNP26038 577 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 STOMP27105 288 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GIFP27352 417 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CD82P27701 267 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSMB6P28072 239 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GJB2P29033 226 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GTF2E2P29084 291 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL12BP29460 328 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBMS1P29558 406 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms