RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TYW3Q6IPR3 259 aaKnown RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 BLOC1S3Q6QNY0 202 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 FRRS1Q6ZNA5 592 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 GGNQ86UU5 652 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 MIER2Q8N344 545 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 METTL25Q8N6Q8 603 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 C9orf106Q8NAJ2 232 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 RELL2Q8NC24 303 aaPredicted RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 JADE3Q92613 823 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 PMM1Q92871 262 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 ZBTB8AQ96BR9 441 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 SLC35G5Q96KT7 338 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 MARK4Q96L34 752 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 SFXN2Q96NB2 322 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 TRNT1Q96Q11 434 aaKnown RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 PANX1Q96RD7 426 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 PIGQQ9BRB3 760 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 SLC35A5Q9BS91 424 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 TRIM8Q9BZR9 551 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 ALKBH4Q9NXW9 302 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 DKKL1Q9UK85 242 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 CAMK2AQ9UQM7 478 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 RPH3AQ9Y2J0 694 aaPredicted RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 AP4B1Q9Y6B7 739 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 MYO9AB2RTY4 2548 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 DOCK7Q96N67 2140 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 ARHGAP21Q5T5U3 1957 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 HCFC1P51610 2035 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 TRBV5-3A0A0A0MS03 114 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 NPIPA5A0A0B4J1W7 369 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 NKX2-6A6NCS4 301 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 SERINC4A6NH21 518 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 CLCA1A8K7I4 914 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 NPIPA7E9PJI5 369 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 H0YC42 278 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 RFXANKO14593 260 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 TGM6O95932 706 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 NPIPA8P0DM63 369 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 BMP2P12643 396 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 ATP6V1C1P21283 382 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 RPS4Y1P22090 263 aaKnown RBP8.75□□□□□ -1.01
RNF4-221ENST00000513643 ADH6P28332 368 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 GCKP35557 465 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 SOAT1P35610 550 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 PGM1P36871 562 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 PCYT1AP49585 367 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 P2RX1P51575 399 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 TPD52P55327 224 aaPredicted RBP8.75□□□□□ -1.01
RNF4-221ENST00000513643 SUMO3P55854 103 aaPredicted RBP8.75□□□□□ -1.01
RNF4-221ENST00000513643 CLDN20P56880 219 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 RAC1P63000 192 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 SKP2Q13309 424 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 FLYWCH1Q4VC44 716 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 COX20Q5RI15 118 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 LRIF1Q5T3J3 769 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 OLIG3Q7RTU3 272 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 RNF130Q86XS8 419 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 MSRB3Q8IXL7 192 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 DMRTC2Q8IXT2 367 aaPredicted RBP8.75□□□□□ -1.01
RNF4-221ENST00000513643 TRIML2Q8N7C3 387 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 GOLGA6L1Q8N7Z2 621 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 ZNF527Q8NB42 609 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 TOR1AIP2Q8NFQ8 470 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 B4GALNT2Q8NHY0 566 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 GPR119Q8TDV5 335 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 XAGE5Q8WWM1 108 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 RAB8BQ92930 207 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 MARVELD3Q96A59 401 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 VPS33AQ96AX1 596 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 ROPN1LQ96C74 230 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 ZFP3Q96NJ6 502 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 ZBTB18Q99592 522 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 LAT2Q9GZY6 243 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 PAIP1Q9H074 479 aaKnown RBP8.75□□□□□ -1.01
RNF4-221ENST00000513643 SLC38A1Q9H2H9 487 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 CCDC134Q9H6E4 229 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 KCNJ16Q9NPI9 418 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 EXD2Q9NVH0 621 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 LIPT1Q9Y234 373 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 CCDC168Q8NDH2 2452 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 DSPPQ9NZW4 1301 aa8.75□□□□□ -1.01
RNF4-221ENST00000513643 ABCA4P78363 2273 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 MED12LQ86YW9 2145 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 AGAP5A6NIR3 686 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 SHISA8B8ZZ34 492 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 POLR3GO15318 223 aaPredicted RBP8.74□□□□□ -1.01
RNF4-221ENST00000513643 BCAS1O75363 584 aaPredicted RBP8.74□□□□□ -1.01
RNF4-221ENST00000513643 TNFSF13O75888 250 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 IL2RAP01589 272 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 GSNP06396 782 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 CRHP06850 196 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 CHRM4P08173 479 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 TFPTP0C1Z6 253 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 PRKCAP17252 672 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 IL11P20809 199 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 CTSSP25774 331 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 EIF1P41567 113 aaKnown RBP8.74□□□□□ -1.01
RNF4-221ENST00000513643 KHKP50053 298 aa8.74□□□□□ -1.01
RNF4-221ENST00000513643 CASP9P55211 416 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms