RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 FAM228AQ86W67 206 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 NKAIN4Q8IVV8 208 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 NUP93Q8N1F7 819 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 ITFG1Q8TB96 612 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 RNF139Q8WU17 664 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 BSCL2Q96G97 398 aaPredicted RBP3.48□□□□□ -1.85
PDE4D-220ENST00000512069 SNF8Q96H20 258 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 GBP5Q96PP8 586 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 INTS14Q96SY0 518 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 C2orf40Q9H1Z8 148 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 MARCH7Q9H992 704 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 LIN28AQ9H9Z2 209 aaKnown RBP3.48□□□□□ -1.85
PDE4D-220ENST00000512069 DEPPQ9NTK1 212 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 SPATA2Q9UM82 520 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 AP1M2Q9Y6Q5 423 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 COL12A1Q99715 3063 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 PLXND1Q9Y4D7 1925 aa3.48□□□□□ -1.85
PDE4D-220ENST00000512069 BAZ2BQ9UIF8 2168 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 GOLGA6L7A0A1B0GV03 622 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 C2orf92A0A1B0GVN3 265 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 TRABD2BA6NFA1 517 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 GOLGA8SH3BPF8 625 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 L7N2F9 121 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 HAT1O14929 419 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 HDAC3O15379 428 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SPOPO43791 374 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ZNF354AO60765 605 aaPredicted RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SURF6O75683 361 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 OR6B1O95007 311 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 OR5F1O95221 314 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 MT-ND1P03886 318 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 PDHBP11177 359 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 HPGDP15428 266 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 CD1DP15813 335 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 CCND2P30279 289 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SRD5A2P31213 254 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 CCT6AP40227 531 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 PRKCIP41743 596 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ELK3P41970 407 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 NPBWR1P48145 328 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 TUFMP49411 452 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 GPC3P51654 580 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ARHGDIBP52566 201 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 HADHBP55084 474 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 HAND2P61296 217 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 GNA13Q14344 377 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SNCBQ16143 134 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ODF2Q5BJF6 829 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 RNLSQ5VYX0 342 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 FAM173BQ6P4H8 233 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 EMBQ6PCB8 327 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SHQ1Q6PI26 577 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 C17orf107Q6ZR85 190 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 STOX1Q6ZVD7 989 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 GLRX5Q86SX6 157 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ZNF584Q8IVC4 421 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 GPD1LQ8N335 351 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 RTL3Q8N8U3 475 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 OR1B1Q8NGR6 318 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 CDC26Q8NHZ8 85 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 C8orf46Q8TAG6 207 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SLC22A8Q8TCC7 542 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 AGR3Q8TD06 166 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ING5Q8WYH8 240 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SMPDL3AQ92484 453 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 RAPGEF5Q92565 580 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SLC35C1Q96A29 364 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ELSPBP1Q96BH3 223 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 TCEANC2Q96MN5 208 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 CGREF1Q99674 301 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 TSG101Q99816 390 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ATG101Q9BSB4 218 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 API5Q9BZZ5 524 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 VIPAS39Q9H9C1 493 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 RAB9BQ9NP90 201 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SDHAF3Q9NRP4 125 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 GLRX2Q9NS18 164 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 ZNF446Q9NWS9 450 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 C15orf41Q9Y2V0 281 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 SPTBN1Q01082 2364 aaKnown RBP3.47□□□□□ -1.85
PDE4D-220ENST00000512069 FBN2P35556 2912 aa3.47□□□□□ -1.85
PDE4D-220ENST00000512069 GSTTP1A0A1W2PQM5 241 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 ANKDD1BA6NHY2 528 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 LRRIQ4A6NIV6 560 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 KLLNB2CW77 178 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 CCL16O15467 120 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 GRAP2O75791 330 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 SEMA4FO95754 770 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 ECDO95905 644 aaPredicted RBP3.46□□□□□ -1.86
PDE4D-220ENST00000512069 POLR2MP0CAP2 368 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 GAP43P17677 238 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 FCARP24071 287 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 MAPK3P27361 379 aaPredicted RBP3.46□□□□□ -1.86
PDE4D-220ENST00000512069 GDI1P31150 447 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 SOAT1P35610 550 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 SLC26A5P58743 744 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 SSTP61278 116 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 HSPA14Q0VDF9 509 aa3.46□□□□□ -1.86
PDE4D-220ENST00000512069 CYLC2Q14093 348 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms