RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 PRSS44E7EML9 344 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 H3BTX0 84 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 WWP2O00308 870 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NR5A2O00482 541 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZBTB5O15062 677 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ARPC2O15144 300 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NBR2O15453 112 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CABYRO75952 493 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TXNDC12O95881 172 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ERCC1P07992 297 aaPredicted RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HSMCR30P0CW71 290 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CYBAP13498 195 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CCL5P13501 91 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 UQCRBP14927 111 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MSH3P20585 1137 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ACKR3P25106 362 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LAP3P28838 519 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CSTF2P33240 577 aaKnown RBP eCLIP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CYLC1P35663 651 aaPredicted RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HAAOP46952 286 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CCR4P51679 360 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 VAMP7P51809 220 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 IST1P53990 364 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HNRNPH2P55795 449 aaKnown RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NFATC4Q14934 902 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LINC01620Q4KN68 170 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNF542PQ5EBM4 170 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SLC25A53Q5H9E4 307 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PDZK1Q5T2W1 519 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SPECC1LQ69YQ0 1117 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PTRHD1Q6GMV3 140 aaKnown RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR2A2Q6IF42 318 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR4A47Q6IF82 309 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C8orf82Q6P1X6 216 aaPredicted RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM220Q6QAJ8 160 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 KIAA1328Q86T90 577 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SATL1Q86VE3 508 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 FJX1Q86VR8 437 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C12orf56Q8IXR9 622 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MMD2Q8IY49 270 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SLC7A5P1Q8MH63 180 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNF565Q8N9K5 539 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NEXN-AS1Q8NBZ9 246 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NPEPL1Q8NDH3 523 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR13C9Q8NGT0 318 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR52I2Q8NH67 350 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 WDR36Q8NI36 951 aaKnown RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RNF128Q8TEB7 428 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MAIP1Q8WWC4 291 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TCP11Q8WWU5 503 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ANKRD7Q92527 254 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ELMO1Q92556 727 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SEMA4DQ92854 862 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SH3YL1Q96HL8 342 aaPredicted RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 IGSF21Q96ID5 467 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ELMO2Q96JJ3 720 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LMLNQ96KR4 655 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NDNQ99608 321 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C19orf43Q9BQ61 176 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ACBD6Q9BR61 282 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM175Q9BSA9 504 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TSSK1BQ9BXA7 367 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SPZ1Q9BXG8 430 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MIS12Q9H081 205 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR52A5Q9H2C5 316 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 DPEP2Q9H4A9 486 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C5orf66Q9H5L9 145 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ANKRA2Q9H9E1 313 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RAB18Q9NP72 206 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MRPS30Q9NP92 439 aaKnown RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NLGN3Q9NZ94 848 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SMARCAL1Q9NZC9 954 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 AHSPQ9NZD4 102 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 EMC3Q9P0I2 261 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PITPNC1Q9UKF7 332 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ABCG2Q9UNQ0 655 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NCKAP1Q9Y2A7 1128 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PAM16Q9Y3D7 125 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RHBDD3Q9Y3P4 386 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 YIPF1Q9Y548 306 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SRPRBQ9Y5M8 271 aaKnown RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CHD8Q9HCK8 2581 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SPTBN5Q9NRC6 3674 aaKnown RBP3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LRRC37A2A6NM11 1700 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NID2Q14112 1375 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ABCB11O95342 1321 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 KLF18A0A0U1RQI7 1052 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GOLGA6L9A6NEM1 432 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 YJEFN3A6XGL0 299 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PRR32B1ATL7 298 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TULP2O00295 520 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 BTN3A3O00478 584 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 BCKDKO14874 412 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 BUD23O43709 281 aaKnown RBP3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PFKFB2O60825 505 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RNASEH1O60930 286 aaKnown RBP3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 STX11O75558 287 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SOX30O94993 753 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 BMP10O95393 424 aa3.78□□□□□ -1.8
PDLIM1P4-201ENST00000504327 H1F0P07305 194 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms