RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 DIRAS1O95057 198 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 IFNW1P05000 195 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 CD97P48960 835 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 GAS1P54826 345 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 VLDLRP98155 873 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 FOXD4Q12950 439 aaPredicted RBP17.71■□□□□ 0.42
USP39-218ENST00000493829 KCNAB2Q13303 367 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 SKP2Q13309 424 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 OR6T1Q8NGN1 323 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 RNF138Q8WVD3 245 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 KLHDC3Q9BQ90 382 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 SLC9A8Q9Y2E8 581 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 NTNG1Q9Y2I2 539 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 EML6Q6ZMW3 1958 aa17.71■□□□□ 0.42
USP39-218ENST00000493829 H0Y3Z8 333 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 SYT5O00445 386 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 AP3D1O14617 1153 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 GNB5O14775 395 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 ADAM11O75078 769 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 FKBP6O75344 327 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 PDGFAP04085 211 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 SEMG1P04279 462 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 NPTX1Q15818 432 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 NRF1Q16656 503 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 ZDHHC21Q8IVQ6 265 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 CMIPQ8IY22 773 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 SECISBP2Q96T21 854 aaKnown RBP17.7■□□□□ 0.42
USP39-218ENST00000493829 SMAD5Q99717 465 aaKnown RBP17.7■□□□□ 0.42
USP39-218ENST00000493829 AMBRA1Q9C0C7 1298 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 DEPPQ9NTK1 212 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 CNIH4Q9P003 139 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 MGAQ8IWI9 3026 aa17.7■□□□□ 0.42
USP39-218ENST00000493829 PTPRQQ9UMZ3 2332 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 MKRN2OSH3BPM6 223 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 J3KTA2 159 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 K7EM74 188 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 TIPRLO75663 272 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 NUDT14O95848 222 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 FABP3P05413 133 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 RAP2AP10114 183 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 UMPSP11172 480 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 MASP1P48740 699 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 MDS2Q8NDY4 140 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 FAM71CQ8NEG0 241 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 OIT3Q8WWZ8 545 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 C5orf34Q96MH7 638 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 CHID1Q9BWS9 393 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 RNF32Q9H0A6 362 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 MAGIXQ9H6Y5 334 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 PROK2Q9HC23 129 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 CCM2LQ9NUG4 571 aaPredicted RBP17.69■□□□□ 0.42
USP39-218ENST00000493829 MED11Q9P086 117 aa17.69■□□□□ 0.42
USP39-218ENST00000493829 CPSF4LA6NMK7 179 aaKnown RBP17.68■□□□□ 0.42
USP39-218ENST00000493829 B4DXG7 233 aa17.68■□□□□ 0.42
USP39-218ENST00000493829 TCEA1P23193 301 aaKnown RBP17.68■□□□□ 0.42
USP39-218ENST00000493829 SLC7A1P30825 629 aa17.68■□□□□ 0.42
USP39-218ENST00000493829 COL28A1Q2UY09 1125 aa17.68■□□□□ 0.42
USP39-218ENST00000493829 SLC30A6Q6NXT4 461 aa17.68■□□□□ 0.42
USP39-218ENST00000493829 C19orf48Q6RUI8 117 aa17.68■□□□□ 0.42
USP39-218ENST00000493829 ANGPTL4Q9BY76 406 aa17.68■□□□□ 0.42
USP39-218ENST00000493829 S100A14Q9HCY8 104 aa17.68■□□□□ 0.42
USP39-218ENST00000493829 AP4S1Q9Y587 144 aa17.68■□□□□ 0.42
USP39-218ENST00000493829 PINLYPA6NC86 204 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 H3BNX3 289 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 CDC40O60508 579 aaKnown RBP eCLIP17.67■□□□□ 0.42
USP39-218ENST00000493829 FAM87AP0C7U9 286 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 ADH7P40394 386 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 RFC3P40938 356 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 TNFSF10P50591 281 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 ZNF136P52737 540 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 KCNC4Q03721 635 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 C17orf67Q0P5P2 114 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 SNTA1Q13424 505 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 IGFL2Q6UWQ7 119 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 TSEN54Q7Z6J9 526 aaKnown RBP17.67■□□□□ 0.42
USP39-218ENST00000493829 B4GALNT2Q8NHY0 566 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 SNRNP27Q8WVK2 155 aaKnown RBP17.67■□□□□ 0.42
USP39-218ENST00000493829 SLC39A7Q92504 469 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 HAS2Q92819 552 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 C7orf34Q96L11 122 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 RYDENQ9NUL5 291 aaKnown RBP17.67■□□□□ 0.42
USP39-218ENST00000493829 RHCGQ9UBD6 479 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 PCDHGA9Q9Y5G4 932 aaKnown RBP17.67■□□□□ 0.42
USP39-218ENST00000493829 TPST2O60704 377 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 SP1P08047 785 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 CD46P15529 392 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 HTR2AP28223 471 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 GANABQ14697 944 aaKnown RBP17.67■□□□□ 0.42
USP39-218ENST00000493829 RCN1Q15293 331 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 ZNF766Q5HY98 468 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 GALNTL5Q7Z4T8 443 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 PACS2Q86VP3 889 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 RANBP3LQ86VV4 465 aaPredicted RBP17.67■□□□□ 0.42
USP39-218ENST00000493829 TSPYL5Q86VY4 417 aaPredicted RBP17.67■□□□□ 0.42
USP39-218ENST00000493829 GRAMD2AQ8IUY3 354 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 MISPQ8IVT2 679 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 CADM2Q8N3J6 435 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 ABHD17AQ96GS6 310 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 MCHR1Q99705 422 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 ARHGAP9Q9BRR9 750 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms