RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	UBTD1	Q9HAC8	227 aa		11.16	□□□□□ -0.62
SREBF1-215	ENST00000487401	PLSCR4	Q9NRQ2	329 aa		11.16	□□□□□ -0.62
SREBF1-215	ENST00000487401	GLRX2	Q9NS18	164 aa		11.16	□□□□□ -0.62
SREBF1-215	ENST00000487401	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.16	□□□□□ -0.62
SREBF1-215	ENST00000487401	EML6	Q6ZMW3	1958 aa		11.16	□□□□□ -0.62
SREBF1-215	ENST00000487401		A0A0J9YW62	118 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	GJE1	A6NN92	205 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	DEFB108A	A8MXU0	73 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZNF195	O14628	629 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	SMPD2	O60906	423 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	SS18L1	O75177	396 aa	Predicted RBP	11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	CREB1	P16220	341 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	PPP3CB	P16298	524 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	IL11	P20809	199 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	FPR1	P21462	350 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	PSMA4	P25789	261 aa	Known RBP	11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	HOXC12	P31275	282 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	ARRB2	P32121	409 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	SFTPD	P35247	375 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	SOAT1	P35610	550 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	RNF144A	P50876	292 aa	Predicted RBP	11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	ATP12A	P54707	1039 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	ACKR1	Q16570	336 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	CTU2	Q2VPK5	515 aa	Known RBP	11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	KLHL26	Q53HC5	615 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	DCST2	Q5T1A1	773 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	SHE	Q5VZ18	495 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	P3H2	Q8IVL5	708 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	WFDC11	Q8NEX6	87 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	PSMA8	Q8TAA3	256 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	POC1B	Q8TC44	478 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	SFXN5	Q8TD22	340 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	AEN	Q8WTP8	325 aa	Known RBP	11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	NUDT8	Q8WV74	236 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	CAVIN3	Q969G5	261 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	PIGT	Q969N2	578 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	NPAS1	Q99742	590 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	DUSP26	Q9BV47	211 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	CARD8	Q9Y2G2	431 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	ITPR3	Q14573	2671 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	NCKAP5	O14513	1909 aa		11.15	□□□□□ -0.62
SREBF1-215	ENST00000487401	MAP1A	P78559	2803 aa	Predicted RBP	11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	NPIPA5	A0A0B4J1W7	369 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	WDR91	A4D1P6	747 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	NPIPA7	E9PJI5	369 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	TYROBP	O43914	113 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	LINGO3	P0C6S8	592 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	NPIPA8	P0DM63	369 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	G6PD	P11413	515 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	CCKAR	P32238	428 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	P2RX1	P51575	399 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	ZNF117	Q03924	483 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	EMX2	Q04743	252 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	FOXF1	Q12946	379 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	KRT71	Q3SY84	523 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	BEND4	Q6ZU67	534 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	RIMKLA	Q8IXN7	391 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	ZNF614	Q8N883	585 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	ATP6V1C2	Q8NEY4	427 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	OR5AK3P	Q8NH89	298 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	FBXO27	Q8NI29	283 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	ROBO4	Q8WZ75	1007 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	ARL8A	Q96BM9	186 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	PIP5K1A	Q99755	562 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	TMEM109	Q9BVC6	243 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	GSX1	Q9H4S2	264 aa	Predicted RBP	11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	DLL4	Q9NR61	685 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	GPATCH2	Q9NW75	528 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	NOP53	Q9NZM5	478 aa	Known RBP	11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	PCDHGB4	Q9UN71	923 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	DTNA	Q9Y4J8	743 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	GPC6	Q9Y625	555 aa	Predicted RBP	11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	KCNE3	Q9Y6H6	103 aa		11.14	□□□□□ -0.63
SREBF1-215	ENST00000487401	DUXA	A6NLW8	204 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	RGS16	O15492	202 aa	Predicted RBP	11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	SIAH2	O43255	324 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	OIP5	O43482	229 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	SERPINE1	P05121	402 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	TUBB	P07437	444 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	MYZAP	P0CAP1	466 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	MATN1	P21941	496 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	ELK4	P28324	431 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	ADH6	P28332	368 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	ETV4	P43268	484 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	SUMO3	P55854	103 aa	Predicted RBP	11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	CLDN8	P56748	225 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	HBA1	P69905	142 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	CHI3L2	Q15782	390 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	PDCD2	Q16342	344 aa	Predicted RBP	11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	SMU1	Q2TAY7	513 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	BEX5	Q5H9J7	111 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	TMEM201	Q5SNT2	666 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	WDR93	Q6P2C0	686 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	CBLN3	Q6UW01	205 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	C20orf204	Q6ZNR8	217 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	C6orf120	Q7Z4R8	191 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	BIVM	Q86UB2	503 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	CXorf67	Q86X51	503 aa	Predicted RBP	11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	TMCO5A	Q8N6Q1	288 aa		11.13	□□□□□ -0.63

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