RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 DOK1Q99704 481 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 BCL7BQ9BQE9 202 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 ZPBPQ9BS86 351 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 SLC19A3Q9BZV2 496 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 WWTR1Q9GZV5 400 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 NXF5Q9H1B4 397 aaKnown RBP10.72□□□□□ -0.69
PRKCB-207ENST00000486868 C12orf10Q9HB07 376 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 RXFP3Q9NSD7 469 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 ZNF223Q9UK11 482 aaPredicted RBP10.72□□□□□ -0.69
PRKCB-207ENST00000486868 SLC7A7Q9UM01 511 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 RP1P56715 2156 aa10.72□□□□□ -0.69
PRKCB-207ENST00000486868 NPIPA5A0A0B4J1W7 369 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 IDSB3KWA1 339 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 NPIPA7E9PJI5 369 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 H3BN98 237 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 SCDO00767 359 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 XPNPEP2O43895 674 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 EIF4E2O60573 245 aaKnown RBP10.71□□□□□ -0.69
PRKCB-207ENST00000486868 TIAF1O95411 115 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 CSTAP01040 98 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 HMGN1P05114 100 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 KLK3P07288 261 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-207ENST00000486868 NPIPA8P0DM63 369 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 PRG2P13727 222 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 COL5A1P20908 1838 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-207ENST00000486868 ACVR2AP27037 513 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 DCKP27707 260 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 SLC15A1P46059 708 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 SLC6A8P48029 635 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 RAB15P59190 212 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 PMS2P3Q13401 168 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 CNPY1Q3B7I2 92 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 SLC27A4Q6P1M0 643 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 ZNF517Q6ZMY9 492 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-207ENST00000486868 Q6ZPB1 254 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-207ENST00000486868 PTCHD4Q6ZW05 846 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 SLCO6A1Q86UG4 719 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 LAPTM4BQ86VI4 370 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 CCDC103Q8IW40 242 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 NRMQ8IXM6 262 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 C9orf40Q8IXQ3 194 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 CDK20Q8IZL9 346 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 B3GNT7Q8NFL0 401 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 OR4C3Q8NH37 302 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 TEX47Q8TBZ9 253 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 BRIX1Q8TDN6 353 aaKnown RBP10.71□□□□□ -0.69
PRKCB-207ENST00000486868 SPSB2Q99619 263 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 CDC6Q99741 560 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 GPA33Q99795 319 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 FAM117AQ9C073 453 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 LAT2Q9GZY6 243 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 CXorf56Q9H5V9 222 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 SYNDIG1Q9H7V2 258 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 HHATLQ9HCP6 504 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 RASSF1Q9NS23 344 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 PAK1IP1Q9NWT1 392 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-207ENST00000486868 OCIAD1Q9NX40 245 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 PTTG2Q9NZH5 202 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 CCDC88CQ9P219 2028 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 RSL24D1Q9UHA3 163 aaKnown RBP10.71□□□□□ -0.69
PRKCB-207ENST00000486868 MED31Q9Y3C7 131 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 CDH10Q9Y6N8 788 aa10.71□□□□□ -0.69
PRKCB-207ENST00000486868 SPTBP11277 2137 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 LOC102723996A0A087X1L8 192 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 A0A1B0GWA3 101 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 LNP1A1A4G5 178 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 IRGMA1A4Y4 181 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 TRIM64BA6NI03 449 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 OR6C70A6NIJ9 312 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 SNTNA6NMZ2 147 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 A8MUA0 341 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 ALG1L2C9J202 215 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 PTGES3LE9PB15 166 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 H3BSA7 217 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 RCBTB2O95199 551 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 UTS2O95399 124 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 CDK1P06493 297 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 GKN3PP0CG01 181 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 HPGDP15428 266 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 POU1F1P28069 291 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 PCYT1AP49585 367 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 TMBIM6P55061 237 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 COPZ1P61923 177 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 HOXC5Q00444 222 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 EFR3AQ14156 821 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 GINS1Q14691 196 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 RAB39AQ14964 217 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 TBCEQ15813 527 aaPredicted RBP10.7□□□□□ -0.7
PRKCB-207ENST00000486868 SYT6Q5T7P8 510 aaPredicted RBP10.7□□□□□ -0.7
PRKCB-207ENST00000486868 ZNF620Q6ZNG0 422 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 CPEB2Q7Z5Q1 589 aaKnown RBP10.7□□□□□ -0.7
PRKCB-207ENST00000486868 MISPQ8IVT2 679 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 ZNF321PQ8N8H1 164 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 OR5L2Q8NGL0 311 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 TMEM255BQ8WV15 326 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 GGHQ92820 318 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 FGF11Q92914 225 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 UBE2FQ969M7 185 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 VMP1Q96GC9 406 aa10.7□□□□□ -0.7
PRKCB-207ENST00000486868 CRELD1Q96HD1 420 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms