RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 OAZ3Q9UMX2 235 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 YARS2Q9Y2Z4 477 aaKnown RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 SPACA6W5XKT8 324 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 MTORP42345 2549 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 NUP214P35658 2090 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 C7orf72A4D263 438 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 A8MVJ9 347 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 C17orf105B2RV13 164 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 G3V2T6 193 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 UPK1AO00322 258 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SOCS2O14508 198 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 PROM1O43490 865 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 FGF17O60258 216 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 CTNSO60931 367 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 GLSO94925 669 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 F12P00748 615 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SEMG1P04279 462 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 FABP3P05413 133 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 RFPL3SP0C7P2 107 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF23P17027 643 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ITGA2P17301 1181 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 TNNI3P19429 210 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 MPIP34949 423 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SOAT1P35610 550 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 PIGAP37287 484 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 MAGEA5P43359 124 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ALDH3A2P51648 485 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 RPS6KA3P51812 740 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 DSTNP60981 165 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SELENOWP63302 87 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 RNF4P78317 190 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 CDK6Q00534 326 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 PLGLB1Q02325 96 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SCARB2Q14108 478 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 DAG1Q14118 895 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 TESK1Q15569 626 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 NRF1Q16656 503 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SPDYE7PQ495Y7 208 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 GXYLT1Q4G148 440 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 LRRC23Q53EV4 343 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 PRAMEF8Q5VWM4 474 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 PRAMEF7Q5VXH5 474 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 C18orf63Q68DL7 685 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SLC48A1Q6P1K1 146 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 TMEM154Q6P9G4 183 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 UGT2A3Q6UWM9 527 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 CARM1Q86X55 608 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 EPHX4Q8IUS5 362 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 LIX1LQ8IVB5 337 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ZDHHC21Q8IVQ6 265 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF595Q8IYB9 648 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 C10orf111Q8N326 155 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 DHRSXQ8N5I4 330 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 TMEM251Q8N6I4 163 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 OR56A1Q8NGH5 318 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 MIPOL1Q8TD10 442 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SLC2A12Q8TD20 617 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF721Q8TF20 911 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 RASSF5Q8WWW0 418 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 TFAP2CQ92754 450 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 AMDHD1Q96NU7 426 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 BBS4Q96RK4 519 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF347Q96SE7 839 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 SPOCK3Q9BQ16 436 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 YTHDF1Q9BYJ9 559 aaKnown RBP8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 GABARAPL1Q9H0R8 117 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF696Q9H7X3 374 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 NTN4Q9HB63 628 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 C3orf14Q9HBI5 128 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 TIMMDC1Q9NPL8 285 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 HPF1Q9NWY4 346 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 TEX10Q9NXF1 929 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 TUBA8Q9NY65 449 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 CLCA3PQ9Y6N3 262 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF780BQ9Y6R6 833 aa8.6□□□□□ -1.03
TMEM39A-208ENST00000486159 PHF3Q92576 2039 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 A0A1W2PR48 441 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 A6NHS1 94 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 C5orf58C9J3I9 102 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 CLDN4O14493 209 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 SOX30O94993 753 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 NADKO95544 446 aaPredicted RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF682O95780 498 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 AIFM1O95831 613 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 AGR2O95994 175 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 NR2F6P10588 404 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 IGFBP2P18065 325 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ENDOUP21128 410 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 CNR1P21554 472 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 MYF6P23409 242 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 CAPGP40121 348 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 ADH7P40394 386 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 CCT3P49368 545 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 DLX5P56178 289 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 PCBP3P57721 371 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 PRR5P85299 388 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 TNFRSF17Q02223 184 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 FOXO1Q12778 655 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 STX4Q12846 297 aa8.59□□□□□ -1.03
TMEM39A-208ENST00000486159 MERTKQ12866 999 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms