RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NAXDQ8IW45 347 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 C9orf40Q8IXQ3 194 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 ZNF440Q8IYI8 595 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 ENTHD1Q8IYW4 607 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 PIGXQ8TBF5 258 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 APH1BQ8WW43 257 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 CNOT9Q92600 299 aaKnown RBP24.19■■□□□ 1.46
SHOX2-204ENST00000483851 SPSB2Q99619 263 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 TRIM2Q9C040 744 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 TMEM27Q9HBJ8 222 aa24.19■■□□□ 1.46
SHOX2-204ENST00000483851 SERINC4A6NH21 518 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 THY1P04216 161 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 CCNA2P20248 432 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 KLHL26Q53HC5 615 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 MBOAT2Q6ZWT7 520 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 ZNF614Q8N883 585 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 LSMEM1Q8N8F7 131 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 RHOXF1Q8NHV9 184 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 CDC6Q99741 560 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 CTRCQ99895 268 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 WWTR1Q9GZV5 400 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 SCN3BQ9NY72 215 aa24.18■■□□□ 1.46
SHOX2-204ENST00000483851 C19orf25Q9UFG5 118 aaPredicted RBP24.18■■□□□ 1.46
SHOX2-204ENST00000483851 SAGE2PA6NJ88 616 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 INMTO95050 263 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 GKN3PP0CG01 181 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 PRG2P13727 222 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 HTR2AP28223 471 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 TSPAN31Q12999 210 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 SLC16A12Q6ZSM3 486 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 ZNF441Q8N8Z8 693 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 B3GNT7Q8NFL0 401 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 OR4C3Q8NH37 302 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 FAM81AQ8TBF8 368 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 TP53INP1Q96A56 240 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 TMEM9BQ9NQ34 198 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 SLC7A7Q9UM01 511 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 ZNF99A8MXY4 864 aaPredicted RBP24.17■■□□□ 1.46
SHOX2-204ENST00000483851 NOL3O60936 208 aaKnown RBP24.17■■□□□ 1.46
SHOX2-204ENST00000483851 CBFA2T3O75081 653 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 GSSP48637 474 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 TMEM205Q6UW68 189 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 NKAIN4Q8IVV8 208 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 SUMF1Q8NBK3 374 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 UBE2FQ969M7 185 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 STRADBQ9C0K7 418 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 C11orf16Q9NQ32 467 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 RNF6Q9Y252 685 aa24.17■■□□□ 1.46
SHOX2-204ENST00000483851 PRR33A8MZF0 331 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 AGRPO00253 132 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 CCL4P13236 92 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 ACAA2P42765 397 aaKnown RBP24.16■■□□□ 1.46
SHOX2-204ENST00000483851 RAB15P59190 212 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 SF3A2Q15428 464 aaKnown RBP24.16■■□□□ 1.46
SHOX2-204ENST00000483851 SMN1Q16637 294 aaKnown RBP24.16■■□□□ 1.46
SHOX2-204ENST00000483851 SLX4IPQ5VYV7 408 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 SHISA6Q6ZSJ9 500 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 NFAM1Q8NET5 270 aaPredicted RBP24.16■■□□□ 1.46
SHOX2-204ENST00000483851 HS6ST2Q96MM7 605 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 GAL3ST4Q96RP7 486 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 FUNDC2Q9BWH2 189 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 IMPAD1Q9NX62 359 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 SLC39A1Q9NY26 324 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 NTNG1Q9Y2I2 539 aa24.16■■□□□ 1.46
SHOX2-204ENST00000483851 FAM86C2PA6NEL3 165 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 CSTAP01040 98 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 FPR3P25089 353 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 KRT20P35900 424 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 OMPP47874 163 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 Q6ZPB1 254 aaPredicted RBP24.15■■□□□ 1.46
SHOX2-204ENST00000483851 ANKRD13BQ86YJ7 626 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 TBC1D15Q8TC07 691 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 TRUB1Q8WWH5 349 aaKnown RBP24.15■■□□□ 1.46
SHOX2-204ENST00000483851 PRSS27Q9BQR3 290 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 EDEM2Q9BV94 578 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 CCNB1IP1Q9NPC3 277 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 PLCXD1Q9NUJ7 323 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 GPN3Q9UHW5 284 aaPredicted RBP24.15■■□□□ 1.46
SHOX2-204ENST00000483851 ENPP5Q9UJA9 477 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 TP53P04637 393 aaPredicted RBP24.15■■□□□ 1.46
SHOX2-204ENST00000483851 NGFRP08138 427 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 HPGDP15428 266 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 TBXA2RP21731 343 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 CALRP27797 417 aaKnown RBP24.15■■□□□ 1.46
SHOX2-204ENST00000483851 IDH2P48735 452 aaKnown RBP24.15■■□□□ 1.46
SHOX2-204ENST00000483851 RASSF6Q6ZTQ3 369 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 P3H2Q8IVL5 708 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 SLC34A3Q8N130 599 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 FAM71CQ8NEG0 241 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 EFHD2Q96C19 240 aaPredicted RBP24.15■■□□□ 1.46
SHOX2-204ENST00000483851 LPAR4Q99677 370 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 ZPBPQ9BS86 351 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 CRB3Q9BUF7 120 aa24.15■■□□□ 1.46
SHOX2-204ENST00000483851 SCDO00767 359 aa24.14■■□□□ 1.45
SHOX2-204ENST00000483851 CHP2O43745 196 aa24.14■■□□□ 1.45
SHOX2-204ENST00000483851 CNOT3O75175 753 aaKnown RBP24.14■■□□□ 1.45
SHOX2-204ENST00000483851 BCAS1O75363 584 aaPredicted RBP24.14■■□□□ 1.45
SHOX2-204ENST00000483851 LYPD3O95274 346 aa24.14■■□□□ 1.45
SHOX2-204ENST00000483851 INHBBP09529 407 aa24.14■■□□□ 1.45
SHOX2-204ENST00000483851 GABRB1P18505 474 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms