RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SLMAPQ14BN4 828 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF789Q5FWF6 425 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 AGAP6Q5VW22 663 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF776Q68DI1 518 aaPredicted RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 CDHR3Q6ZTQ4 885 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 HPS6Q86YV9 775 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 CCDC83Q8IWF9 413 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 TMCO5AQ8N6Q1 288 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 RXFP2Q8WXD0 754 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 SMPDL3AQ92484 453 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 AP2M1Q96CW1 435 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 TRIM44Q96DX7 344 aaPredicted RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 CDHR1Q96JP9 859 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 TEKT3Q9BXF9 490 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 LRRN3Q9H3W5 708 aa4.05□□□□□ -1.76
CCDC171-207ENST00000478913 THAP10Q9P2Z0 257 aaPredicted RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 MYO5AQ9Y4I1 1855 aaKnown RBP4.05□□□□□ -1.76
CCDC171-207ENST00000478913 A0A087X0K7 114 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 MAGEB16A2A368 324 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 NKX2-6A6NCS4 301 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 A8MU76 341 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 CD5LO43866 347 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ANGPTL1O95841 491 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ADORA3P0DMS8 318 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ATF6P18850 670 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF10P21506 573 aaPredicted RBP4.04□□□□□ -1.76
CCDC171-207ENST00000478913 SLC34A1Q06495 639 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 GPR50Q13585 617 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF343Q6P1L6 599 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 TMEM64Q6YI46 380 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 CDR2LQ86X02 465 aaPredicted RBP4.04□□□□□ -1.76
CCDC171-207ENST00000478913 Q8N377 158 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 SPPL2AQ8TCT8 520 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF274Q96GC6 653 aaPredicted RBP4.04□□□□□ -1.76
CCDC171-207ENST00000478913 CTRCQ99895 268 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 CCM2Q9BSQ5 444 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 DESI2Q9BSY9 194 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 MMADHCQ9H3L0 296 aaPredicted RBP4.04□□□□□ -1.76
CCDC171-207ENST00000478913 VIPAS39Q9H9C1 493 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 UBE2TQ9NPD8 197 aaPredicted RBP4.04□□□□□ -1.76
CCDC171-207ENST00000478913 GPR83Q9NYM4 423 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF510Q9Y2H8 683 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 ETV7Q9Y603 341 aa4.04□□□□□ -1.76
CCDC171-207ENST00000478913 TDRD6O60522 2096 aaKnown RBP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 IGLV4-3A0A075B6K6 122 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 IGKV6D-21A0A0A0MT36 114 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 IGKV3D-20A0A0C4DH25 116 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 H0YIG0 161 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 SLC9A3R1O14745 358 aaPredicted RBP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 B4GAT1O43505 415 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 SMPD2O60906 423 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 CCNE2O96020 404 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 HOXD4P09016 255 aaPredicted RBP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 ACKR3P25106 362 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 MAT2AP31153 395 aaKnown RBP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 FCGR2BP31994 310 aaPredicted RBP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 FCGR2CP31995 323 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 FZD2Q14332 565 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 WDR43Q15061 677 aaKnown RBP eCLIP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF146Q15072 292 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 C3AR1Q16581 482 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 RFTN2Q52LD8 501 aaPredicted RBP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 DCAF12Q5T6F0 453 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 RNF130Q86XS8 419 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 TMEM25Q86YD3 366 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 OR2T3Q8NH03 318 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 LMX1AQ8TE12 382 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 FAM222BQ8WU58 562 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 TAF15Q92804 592 aaKnown RBP eCLIP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 FRAT1Q92837 279 aaPredicted RBP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 PANX3Q96QZ0 392 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 CHCHD5Q9BSY4 110 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 PINK1Q9BXM7 581 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 CALN1Q9BXU9 219 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 FUT8Q9BYC5 575 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 LRRC2Q9BYS8 371 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 UCK2Q9BZX2 261 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 TUBB1Q9H4B7 451 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 RNPEPL1Q9HAU8 725 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 LY9Q9HBG7 655 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 S100A14Q9HCY8 104 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 IL1RAPQ9NPH3 570 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 ARGLU1Q9NWB6 273 aaPredicted RBP4.03□□□□□ -1.76
CCDC171-207ENST00000478913 CNIH4Q9P003 139 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 CTSZQ9UBR2 303 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 SH3GLB1Q9Y371 365 aa4.03□□□□□ -1.76
CCDC171-207ENST00000478913 PLIN4Q96Q06 1357 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 SCN8AQ9UQD0 1980 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 BAZ2AQ9UIF9 1905 aaKnown RBP4.02□□□□□ -1.77
CCDC171-207ENST00000478913 ZNF749O43361 778 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 DNAJB6O75190 326 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 TPM2P07951 284 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 TOP1P11387 765 aaKnown RBP4.02□□□□□ -1.77
CCDC171-207ENST00000478913 SKILP12757 684 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 CD1DP15813 335 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 GJB2P29033 226 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 MARCKSP29966 332 aaPredicted RBP4.02□□□□□ -1.77
CCDC171-207ENST00000478913 KIF5BP33176 963 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms