RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ZNF829Q3KNS6 432 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-217ENST00000475693 PLAG1Q6DJT9 500 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 OR2T5Q6IEZ7 315 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 OR2T29Q8NH02 315 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 CDCP1Q9H5V8 836 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 PALMDQ9NP74 551 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 ANKRD10Q9NXR5 420 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 DNAJB9Q9UBS3 223 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF232Q9UNY5 417 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 CPSF4LA6NMK7 179 aaKnown RBP16.61■□□□□ 0.25
ATG4B-217ENST00000475693 NKX2-8O15522 239 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 OXSR1O95747 527 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-217ENST00000475693 F10P00742 488 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 DBIP07108 87 aaKnown RBP16.61■□□□□ 0.25
ATG4B-217ENST00000475693 GNAO1P09471 354 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 PRKAR1AP10644 381 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 NID1P14543 1247 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 PRKAR1BP31321 381 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 RYKP34925 604 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 CAPGP40121 348 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 ATP12AP54707 1039 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 DCAF7P61962 342 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 CHAF1BQ13112 559 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 RAPSNQ13702 412 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATG4B-217ENST00000475693 USP51Q70EK9 711 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 MARCH3Q86UD3 253 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 C7orf57Q8NEG2 295 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 ADAMTS17Q8TE56 1095 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 BORCS5Q969J3 196 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 THSD1Q9NS62 852 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 DOCK10Q96BY6 2186 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 hCG_2014768A0A024R1R8 64 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 CDHR4A6H8M9 788 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-217ENST00000475693 H0YAE9 185 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 DEAF1O75398 565 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-217ENST00000475693 SPIBQ01892 262 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 PIWIL3Q7Z3Z3 882 aaKnown RBP16.6■□□□□ 0.25
ATG4B-217ENST00000475693 SLC34A3Q8N130 599 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 DHRSXQ8N5I4 330 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF524Q96C55 264 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 HSPBAP1Q96EW2 488 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 SMURF2Q9HAU4 748 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 TBC1D23Q9NUY8 699 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 SMPD3Q9NY59 655 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-217ENST00000475693 IFT52Q9Y366 437 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 ENPP4Q9Y6X5 453 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 SPENQ96T58 3664 aaKnown RBP16.6■□□□□ 0.25
ATG4B-217ENST00000475693 HEATR5AQ86XA9 2040 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 PCNX3Q9H6A9 2034 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 TO15178 435 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 E2F6O75461 281 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 ITGA10O75578 1167 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 CYC1P08574 325 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 CD63P08962 238 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF12P17014 697 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 ENTPD1P49961 510 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 KCNC4Q03721 635 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF468Q5VIY5 522 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-217ENST00000475693 OR5M10Q6IEU7 315 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 CBLN3Q6UW01 205 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 NUBPLQ8TB37 319 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 RASSF5Q8WWW0 418 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 NODALQ96S42 347 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 RASL10BQ96S79 203 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 ARHGDIGQ99819 225 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 BDH2Q9BUT1 245 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 SLC13A4Q9UKG4 626 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 A4GNTQ9UNA3 340 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 SAMHD1Q9Y3Z3 626 aaKnown RBP16.6■□□□□ 0.25
ATG4B-217ENST00000475693 PCDHGA6Q9Y5G7 932 aa16.6■□□□□ 0.25
ATG4B-217ENST00000475693 PCDH17O14917 1159 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 PRSS23O95084 383 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 IGHEP01854 428 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 SOX3P41225 446 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF136P52737 540 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 RGS8P57771 180 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-217ENST00000475693 RTP5Q14D33 572 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF141Q15928 474 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 KLHL26Q53HC5 615 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 STK32CQ86UX6 486 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 MEX3DQ86XN8 651 aaKnown RBP16.59■□□□□ 0.25
ATG4B-217ENST00000475693 BRIX1Q8TDN6 353 aaKnown RBP16.59■□□□□ 0.25
ATG4B-217ENST00000475693 ABTB1Q969K4 478 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-217ENST00000475693 SH3YL1Q96HL8 342 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-217ENST00000475693 B3GNT4Q9C0J1 378 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 MMP25Q9NPA2 562 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 KCND3Q9UK17 655 aa16.59■□□□□ 0.25
ATG4B-217ENST00000475693 H3BMQ9 156 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 EI24O14681 340 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 SCO2O43819 266 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 THY1P04216 161 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 HNRNPCP07910 306 aaKnown RBP eCLIP16.58■□□□□ 0.253e-8■■■■■ 26.9
ATG4B-217ENST00000475693 LIPCP11150 499 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 KRT20P35900 424 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 HLCSP50747 726 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 EXT1Q16394 746 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 LYPD8Q6UX82 237 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 OR5L2Q8NGL0 311 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms