RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 A0A1W2PQD3 144 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 OR6C70A6NIJ9 312 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 GASTP01350 101 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 UBL4AP11441 157 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 RPS15P62841 145 aaKnown RBP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 MYBPC1Q00872 1141 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 NPRL3Q12980 569 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 TARDBPQ13148 414 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 EFR3AQ14156 821 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF691Q5VV52 312 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 PGBD2Q6P3X8 592 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF730Q6ZMV8 503 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 RRM2BQ7LG56 351 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 TMPRSS12Q86WS5 348 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 NLGN4XQ8N0W4 816 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 SETD9Q8NE22 299 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 NLGN4YQ8NFZ3 816 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 PIGXQ8TBF5 258 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 SLC22A8Q8TCC7 542 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 PHOSPHO1Q8TCT1 267 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 THAP3Q8WTV1 239 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 ACOT11Q8WXI4 607 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 MUS81Q96NY9 551 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 PITX2Q99697 317 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 DEFB126Q9BYW3 111 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 UCK2Q9BZX2 261 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 GRIP2Q9C0E4 1043 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 POLR1BQ9H9Y6 1135 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 LIN28AQ9H9Z2 209 aaKnown RBP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 KRCC1Q9NPI7 259 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 EXOSC3Q9NQT5 275 aaKnown RBP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 FARSAQ9Y285 508 aaKnown RBP12.62□□□□□ -0.39
TRAF4-210ENST00000475329 PCDHGB5Q9Y5G0 923 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 NPFFR2Q9Y5X5 522 aa12.62□□□□□ -0.39
TRAF4-210ENST00000475329 A0A087WUU8 490 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 NSG1A0A0A6YYJ2 146 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 C21orf140B9A014 251 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 GTPBP1O00178 669 aaKnown RBP12.61□□□□□ -0.39
TRAF4-210ENST00000475329 SOCS6O14544 535 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 RAD1O60671 282 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 PPM1BO75688 479 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 NADKO95544 446 aaPredicted RBP12.61□□□□□ -0.39
TRAF4-210ENST00000475329 THY1P04216 161 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 POU2F1P14859 743 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 ENDOUP21128 410 aaKnown RBP12.61□□□□□ -0.39
TRAF4-210ENST00000475329 POLR2IP36954 125 aaKnown RBP12.61□□□□□ -0.39
TRAF4-210ENST00000475329 STAT5AP42229 794 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 ACAA2P42765 397 aaKnown RBP12.61□□□□□ -0.39
TRAF4-210ENST00000475329 CLK3P49761 638 aaKnown RBP12.61□□□□□ -0.39
TRAF4-210ENST00000475329 RPS18P62269 152 aaKnown RBP12.61□□□□□ -0.39
TRAF4-210ENST00000475329 SKP2Q13309 424 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 DNASE1L3Q13609 305 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 NDUFAF6Q330K2 333 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 PLAG1Q6DJT9 500 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 KLHL17Q6TDP4 642 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 KIRREL2Q6UWL6 708 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 NDUFAF7Q7L592 441 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 THAP5Q7Z6K1 395 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 NKAIN4Q8IVV8 208 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 APLFQ8IW19 511 aaPredicted RBP12.61□□□□□ -0.39
TRAF4-210ENST00000475329 TMCO5AQ8N6Q1 288 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 AMER2Q8N7J2 671 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 GATSQ8NAP1 163 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 OR11G2Q8NGC1 345 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 M1APQ8TC57 530 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 GNPDA2Q8TDQ7 276 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 ELP5Q8TE02 316 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 IMMP1LQ96LU5 166 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 APOL4Q9BPW4 351 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 TBL1XR1Q9BZK7 514 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 FAM117AQ9C073 453 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 ING2Q9H160 280 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF696Q9H7X3 374 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 MMP25Q9NPA2 562 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 RPS6KB2Q9UBS0 482 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 SCOCQ9UIL1 159 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 PCDHGA6Q9Y5G7 932 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 GMPPBQ9Y5P6 360 aa12.61□□□□□ -0.39
TRAF4-210ENST00000475329 MYO15AQ9UKN7 3530 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 A0A0B4J2E0 115 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 A0A1B0GWA3 101 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 A0A1B0GX12 115 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 TMEM200CA6NKL6 621 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 EIF4E1BA6NMX2 242 aaKnown RBP12.6□□□□□ -0.39
TRAF4-210ENST00000475329 ALG1L2C9J202 215 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 E9PQ18 207 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 WWP2O00308 870 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF264O43296 627 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 CHP2O43745 196 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 LYPD3O95274 346 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 NAGAP17050 411 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 GSTM3P21266 225 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 OTX2P32243 289 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 DLSTP36957 453 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 TMED10P49755 219 aaKnown RBP12.6□□□□□ -0.39
TRAF4-210ENST00000475329 NUP107P57740 925 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 ESRRGP62508 458 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 GABREP78334 506 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 FOXK2Q01167 660 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 RAPSNQ13702 412 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms