RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 IFT88Q13099 833 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 PFKFB4Q16877 469 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 TTC19Q6DKK2 380 aaPredicted RBP10.5□□□□□ -0.73
LSM2-209ENST00000470083 SHQ1Q6PI26 577 aaKnown RBP10.5□□□□□ -0.73
LSM2-209ENST00000470083 SLC46A3Q7Z3Q1 461 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 MRPL24Q96A35 216 aaKnown RBP10.5□□□□□ -0.73
LSM2-209ENST00000470083 MS4A14Q96JA4 679 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 RBBP8Q99708 897 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 VRK1Q99986 396 aaPredicted RBP10.5□□□□□ -0.73
LSM2-209ENST00000470083 SAP130Q9H0E3 1048 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 COQ10BQ9H8M1 238 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 GIMAP4Q9NUV9 329 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 TXNDC16Q9P2K2 825 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 SPEF1Q9Y4P9 236 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 ARFGEF3Q5TH69 2177 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 PCNX3Q9H6A9 2034 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 A0A087WV62 115 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 A0A1W2PR80 420 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 CIB4A0PJX0 185 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 GJE1A6NN92 205 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 ZNF724A8MTY0 619 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 B4DSR2 109 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 PSMG1O95456 288 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 ESRRBO95718 433 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 NGFRP08138 427 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 LINGO3P0C6S8 592 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 IVDP26440 423 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 ARL1P40616 181 aaPredicted RBP10.49□□□□□ -0.73
LSM2-209ENST00000470083 ARL4CP56559 192 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 FASTKD3Q14CZ7 662 aaKnown RBP10.49□□□□□ -0.73
LSM2-209ENST00000470083 MLC1Q15049 377 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 ZNHIT3Q15649 155 aaPredicted RBP10.49□□□□□ -0.73
LSM2-209ENST00000470083 METTL2BQ6P1Q9 378 aaKnown RBP10.49□□□□□ -0.73
LSM2-209ENST00000470083 GLCCI1Q86VQ1 547 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 ZNF100Q8IYN0 542 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 SVOPLQ8N434 492 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 FBXO36Q8NEA4 188 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 RHEBL1Q8TAI7 183 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.49□□□□□ -0.73
LSM2-209ENST00000470083 EXOSC8Q96B26 276 aaKnown RBP10.49□□□□□ -0.73
LSM2-209ENST00000470083 CPNE1Q99829 537 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 NOL11Q9H8H0 719 aaKnown RBP10.49□□□□□ -0.73
LSM2-209ENST00000470083 C19orf53Q9UNZ5 99 aaPredicted RBP10.49□□□□□ -0.73
LSM2-209ENST00000470083 USP22Q9UPT9 525 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 TRAF6Q9Y4K3 522 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 TNPO3Q9Y5L0 923 aaKnown RBP10.49□□□□□ -0.73
LSM2-209ENST00000470083 WNK1Q9H4A3 2382 aa10.49□□□□□ -0.73
LSM2-209ENST00000470083 IGHV3-15A0A0B4J1V0 119 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 CCT8L1PA6NM43 557 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 CXorf49A8MYA2 514 aaPredicted RBP10.48□□□□□ -0.73
LSM2-209ENST00000470083 ATP6V1G2-DDX39BF2Z307 99 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 OR7A17O14581 309 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 EFNA2O43921 213 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 SLITRK5O94991 958 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 OXSR1O95747 527 aaPredicted RBP10.48□□□□□ -0.73
LSM2-209ENST00000470083 IGKV1D-16P01601 117 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 IL3P08700 152 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 PGCP20142 388 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 EPHA1P21709 976 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 MPIP34949 423 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 GP5P40197 560 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 CCNG1P51959 295 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 RAC3P60763 192 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 RASGEF1BQ0VAM2 473 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 FOXF1Q12946 379 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 FOXL1Q12952 345 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 TMEM176BQ3YBM2 270 aaPredicted RBP10.48□□□□□ -0.73
LSM2-209ENST00000470083 SGO1Q5FBB7 561 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 LCE2DQ5TA82 110 aaPredicted RBP10.48□□□□□ -0.73
LSM2-209ENST00000470083 FBXW9Q5XUX1 488 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 RAPH1Q70E73 1250 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 GALNT5Q7Z7M9 940 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 C1orf52Q8N6N3 182 aaKnown RBP10.48□□□□□ -0.73
LSM2-209ENST00000470083 GATSQ8NAP1 163 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 TOR1AIP2Q8NFQ8 470 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 ZFP90Q8TF47 636 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 ZNF75CPQ92670 426 aaPredicted RBP10.48□□□□□ -0.73
LSM2-209ENST00000470083 ATP6V1E2Q96A05 226 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 ZNF300Q96RE9 604 aaPredicted RBP10.48□□□□□ -0.73
LSM2-209ENST00000470083 KLHDC3Q9BQ90 382 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 LMF2Q9BU23 707 aaKnown RBP10.48□□□□□ -0.73
LSM2-209ENST00000470083 C1QTNF6Q9BXI9 259 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 ELOVL6Q9H5J4 265 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 SLC35C2Q9NQQ7 365 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 TAS2R16Q9NYV7 291 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 PCDHB14Q9Y5E9 798 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 RYR3Q15413 4870 aa10.48□□□□□ -0.73
LSM2-209ENST00000470083 GOLGA6L10A0A0M3HER8 536 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 CCDC189A1A4V9 331 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 C9JVG2 144 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 KIF2AO00139 706 aaPredicted RBP10.47□□□□□ -0.73
LSM2-209ENST00000470083 PGRMC1O00264 195 aaKnown RBP10.47□□□□□ -0.73
LSM2-209ENST00000470083 CYTIPO60759 359 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 KCNH1O95259 989 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 SLU7O95391 586 aaKnown RBP10.47□□□□□ -0.73
LSM2-209ENST00000470083 DAOP14920 347 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 SERPINF1P36955 418 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 PPOXP50336 477 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 TRAF3Q13114 568 aa10.47□□□□□ -0.73
LSM2-209ENST00000470083 CCNIQ14094 377 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms