RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SFXN2Q96NB2 322 aa17.99■□□□□ 0.47
COL9A3-204ENST00000463487 HOPXQ9BPY8 73 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-204ENST00000463487 IKZF5Q9H5V7 419 aa17.99■□□□□ 0.47
COL9A3-204ENST00000463487 RUBCNLQ9H714 662 aa17.99■□□□□ 0.47
COL9A3-204ENST00000463487 KAT8Q9H7Z6 458 aaKnown RBP17.99■□□□□ 0.47
COL9A3-204ENST00000463487 BCL2L10Q9HD36 194 aa17.99■□□□□ 0.47
COL9A3-204ENST00000463487 ACAD8Q9UKU7 415 aa17.99■□□□□ 0.47
COL9A3-204ENST00000463487 CARD8Q9Y2G2 431 aa17.99■□□□□ 0.47
COL9A3-204ENST00000463487 DSPPQ9NZW4 1301 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 NBASA2RRP1 2371 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 TRGV8A0A0C4DH27 118 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 FIGNL2A6NMB9 653 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 NPIPA2E9PIF3 369 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 NPIPA3F8WFD2 350 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 PYCARD-AS1I3L0S3 204 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 ADAM10O14672 748 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 CYP7B1O75881 506 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 THBS1P07996 1170 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 NUDT7P0C024 238 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 NID1P14543 1247 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 ETS2P15036 469 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 CCR4P51679 360 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 MNAT1P51948 309 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 KCNJ10P78508 379 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 ZNF117Q03924 483 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 SF3B4Q15427 424 aaKnown RBP eCLIP17.98■□□□□ 0.474e-7■■■□□ 18.2
COL9A3-204ENST00000463487 INTS11Q5TA45 600 aaKnown RBP17.98■□□□□ 0.47
COL9A3-204ENST00000463487 MTFR2Q6P444 385 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 HACD2Q6Y1H2 254 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 Q6ZPB1 254 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-204ENST00000463487 OLIG3Q7RTU3 272 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 ZBTB8AQ96BR9 441 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 ZNF607Q96SK3 696 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 SLC39A3Q9BRY0 314 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 LAT2Q9GZY6 243 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 KCNE5Q9UJ90 142 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 ZNF835Q9Y2P0 537 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 ESPL1Q14674 2120 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 ZGRF1Q86YA3 2104 aa17.98■□□□□ 0.47
COL9A3-204ENST00000463487 FXYD1O00168 92 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 SERPINB7O75635 380 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 WISP2O76076 250 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 PGM3O95394 542 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 UBTFL6P0CB48 400 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-204ENST00000463487 UQCRBP14927 111 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 RPS4Y1P22090 263 aaKnown RBP17.97■□□□□ 0.47
COL9A3-204ENST00000463487 CHMP24386 653 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 SLC6A8P48029 635 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 PER3P56645 1201 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 MAPK14Q16539 360 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 NHSL2Q5HYW2 709 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 FAM91A1Q658Y4 838 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 ERICH5Q6P6B1 374 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 ZNF440Q8IYI8 595 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 OR52P1PQ8NH57 321 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 OR5W2Q8NH69 310 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 OR10A6Q8NH74 314 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 ABTB1Q969K4 478 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-204ENST00000463487 QRSL1Q9H0R6 528 aaKnown RBP17.97■□□□□ 0.47
COL9A3-204ENST00000463487 EXOSC3Q9NQT5 275 aaKnown RBP17.97■□□□□ 0.47
COL9A3-204ENST00000463487 TAGLN3Q9UI15 199 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 ICAM5Q9UMF0 924 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 VDAC3Q9Y277 283 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 RPH3AQ9Y2J0 694 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-204ENST00000463487 HRH3Q9Y5N1 445 aa17.97■□□□□ 0.47
COL9A3-204ENST00000463487 SPENQ96T58 3664 aaKnown RBP17.97■□□□□ 0.47
COL9A3-204ENST00000463487 PRRC2CQ9Y520 2896 aaKnown RBP17.96■□□□□ 0.47
COL9A3-204ENST00000463487 PRORSD1PA6NEY8 169 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 C17orf51A8MQB3 221 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 ZIC3O60481 467 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 GABRA1P14867 456 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 ZNF17P17021 662 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 PGCP20142 388 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 EIF1P41567 113 aaKnown RBP17.96■□□□□ 0.47
COL9A3-204ENST00000463487 CA7P43166 264 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 SKP2Q13309 424 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 RABL3Q5HYI8 236 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 RPS26P11Q5JNZ5 115 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-204ENST00000463487 RNF220Q5VTB9 566 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 NET1Q7Z628 596 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-204ENST00000463487 CD163Q86VB7 1156 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 BHLHE22Q8NFJ8 381 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-204ENST00000463487 TMEM234Q8WY98 164 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 TRIM8Q9BZR9 551 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 TP63Q9H3D4 680 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-204ENST00000463487 NDE1Q9NXR1 346 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 SPRR3Q9UBC9 169 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 PRDM4Q9UKN5 801 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 SLC6A5Q9Y345 797 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 NCKAP5O14513 1909 aa17.96■□□□□ 0.47
COL9A3-204ENST00000463487 CENPVL1A0A0U1RR11 272 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 C7orf72A4D263 438 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 WDR1O75083 606 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 HOXD4P09016 255 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-204ENST00000463487 ESRRAP11474 423 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-204ENST00000463487 TCEA1P23193 301 aaKnown RBP17.95■□□□□ 0.46
COL9A3-204ENST00000463487 PTGER4P35408 488 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 PGM1P36871 562 aa17.95■□□□□ 0.46
COL9A3-204ENST00000463487 RNF144AP50876 292 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-204ENST00000463487 SELPLGQ14242 412 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms