RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 G6PDP11413 515 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 PPP3CBP16298 524 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 FPR1P21462 350 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 SFTPDP35247 375 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 FRKP42685 505 aaPredicted RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 SLC1A6P48664 564 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 P2RX1P51575 399 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 SUCLG1P53597 346 aaKnown RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 CLNS1AP54105 237 aaKnown RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 ATP12AP54707 1039 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 SUMO3P55854 103 aaPredicted RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 CLDN20P56880 219 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 B3GALT5-AS1P59052 145 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 FAM27E3Q08E93 113 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 STX3Q13277 289 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 RNPS1Q15287 305 aaKnown RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 GPR68Q15743 365 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 XKR7Q5GH72 579 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 VWA1Q6PCB0 445 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 POMZP3Q6PJE2 187 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 PAMR1Q6UXH9 720 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 ADGRE4PQ86SQ3 457 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 GTPBP8Q8N3Z3 284 aaPredicted RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 OR6K3Q8NGY3 331 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 OR10D3Q8NH80 312 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 OR5AK3PQ8NH89 298 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 OR2V1Q8NHB1 315 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 ZNF563Q8TA94 476 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 RNF138Q8WVD3 245 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 TMEM234Q8WY98 164 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 OSTF1Q92882 214 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 PIGTQ969N2 578 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 CPNE4Q96A23 557 aaPredicted RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 TLCD1Q96CP7 247 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 STARD4Q96DR4 205 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 PIK3IP1Q96FE7 263 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 PKNOX2Q96KN3 472 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 RNF145Q96MT1 663 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 ALPK1Q96QP1 1244 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 TACO1Q9BSH4 297 aaKnown RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 TMEM185BQ9H7F4 350 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 RNF122Q9H9V4 155 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 SSU72Q9NP77 194 aaKnown RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 MED17Q9NVC6 651 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 KLHL28Q9NXS3 571 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 NKIRAS1Q9NYS0 192 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 NTMQ9P121 344 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 GIMAP2Q9UG22 337 aa7.98□□□□□ -1.13
LDB1-203ENST00000461873 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 GPC6Q9Y625 555 aaPredicted RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 SPIN1Q9Y657 262 aaPredicted RBP7.98□□□□□ -1.13
LDB1-203ENST00000461873 KIAA1549Q9HCM3 1950 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 RNF103-CHMP3A0A140T963 221 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 FAM221AA4D161 298 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 TRPC5OSA6NMA1 111 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 C17orf51A8MQB3 221 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 SHISA8B8ZZ34 492 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 ZNF264O43296 627 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 CXCL13O43927 109 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 STX11O75558 287 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 TNFSF13O75888 250 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 IGKV1D-16P01601 117 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 OPN1LWP04000 364 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 UBL4AP11441 157 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 UQCRBP14927 111 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 LBPP18428 481 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 ELK4P28324 431 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 ADH6P28332 368 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 S100A3P33764 101 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 UGT2B10P36537 528 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 CLDN8P56748 225 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 MPP2Q14168 576 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 GNA13Q14344 377 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 DPY19L1Q2PZI1 675 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 DEFB113Q30KQ7 82 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 PLPPR5Q32ZL2 321 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 UGT3A2Q3SY77 523 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 TNFAIP8L3Q5GJ75 292 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 ATG16L1Q676U5 607 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 ALKBH2Q6NS38 261 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 APOOLQ6UXV4 268 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 C6orf120Q7Z4R8 191 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 BTLAQ7Z6A9 289 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 KRTCAP2Q8N6L1 136 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 ANKRD42Q8N9B4 389 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 ZNF610Q8N9Z0 462 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 FAM110BQ8TC76 370 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 MGARPQ8TDB4 240 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 COQ8BQ96D53 544 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 ZHX1-C8orf76Q96EF9 292 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 GIMAP5Q96F15 307 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 KLHL15Q96M94 604 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 OR7D2Q96RA2 312 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 C12orf49Q9H741 205 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 UBTD1Q9HAC8 227 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 NGBQ9NPG2 151 aa7.97□□□□□ -1.13
LDB1-203ENST00000461873 C6orf203Q9P0P8 240 aaPredicted RBP7.97□□□□□ -1.13
LDB1-203ENST00000461873 CLEC4AQ9UMR7 237 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms