RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TMCO5AQ8N6Q1 288 aa17.87■□□□□ 0.45
SGCE-207ENST00000447873 FAM71CQ8NEG0 241 aa17.87■□□□□ 0.45
SGCE-207ENST00000447873 ZNF347Q96SE7 839 aa17.87■□□□□ 0.45
SGCE-207ENST00000447873 GALNT9Q9HCQ5 603 aa17.87■□□□□ 0.45
SGCE-207ENST00000447873 SH2D2AQ9NP31 389 aa17.87■□□□□ 0.45
SGCE-207ENST00000447873 SDHAF3Q9NRP4 125 aa17.87■□□□□ 0.45
SGCE-207ENST00000447873 AGPAT4Q9NRZ5 378 aa17.87■□□□□ 0.45
SGCE-207ENST00000447873 CNIH4Q9P003 139 aa17.87■□□□□ 0.45
SGCE-207ENST00000447873 GNGT2O14610 69 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 AP3D1O14617 1153 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 CLOCKO15516 846 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 HCRTR2O43614 444 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 DEAF1O75398 565 aaPredicted RBP17.86■□□□□ 0.45
SGCE-207ENST00000447873 DIRAS1O95057 198 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 CCL3P10147 92 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 RHCEP18577 417 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 ITPKBP27987 946 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 HOXC5Q00444 222 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 C17orf67Q0P5P2 114 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 NPTX1Q15818 432 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 IQCCQ4KMZ1 466 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 PRAMEF20Q5VT98 475 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 SLC30A6Q6NXT4 461 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 TMEM81Q6P7N7 255 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 CBLN3Q6UW01 205 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 MDGA2Q7Z553 956 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 TSEN54Q7Z6J9 526 aaKnown RBP17.86■□□□□ 0.45
SGCE-207ENST00000447873 CYP4Z1Q86W10 505 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 ZNF440Q8IYI8 595 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 LILRA2Q8N149 483 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 DUSP19Q8WTR2 217 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 SH3YL1Q96HL8 342 aaPredicted RBP17.86■□□□□ 0.45
SGCE-207ENST00000447873 PKP2Q99959 881 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 OSBPL11Q9BXB4 747 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 LAT2Q9GZY6 243 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 EXOSC3Q9NQT5 275 aaKnown RBP17.86■□□□□ 0.45
SGCE-207ENST00000447873 PLA2G3Q9NZ20 509 aa17.86■□□□□ 0.45
SGCE-207ENST00000447873 C6orf203Q9P0P8 240 aaPredicted RBP17.86■□□□□ 0.45
SGCE-207ENST00000447873 NKX1-2Q9UD57 310 aaPredicted RBP17.86■□□□□ 0.45
SGCE-207ENST00000447873 HEATR5AQ86XA9 2040 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 CHD8Q9HCK8 2581 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 CFAP47Q6ZTR5 3102 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 C2orf72A6NCS6 295 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 EIF4E2O60573 245 aaKnown RBP17.85■□□□□ 0.45
SGCE-207ENST00000447873 LDLRP01130 860 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 P04436 131 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 PRG2P13727 222 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 RYKP34925 604 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 PTGDSP41222 190 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 CCR4P51679 360 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 ZNF136P52737 540 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 GAS1P54826 345 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 ZNF117Q03924 483 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 SKP2Q13309 424 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 ATP6AP1Q15904 470 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 AMIGO2Q86SJ2 522 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 ZCCHC14Q8WYQ9 949 aaKnown RBP17.85■□□□□ 0.45
SGCE-207ENST00000447873 MCHR1Q99705 422 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 PRR14Q9BWN1 585 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 SACM1LQ9NTJ5 587 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 PPP4R1LQ9P1A2 415 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 TESQ9UGI8 421 aaKnown RBP17.85■□□□□ 0.45
SGCE-207ENST00000447873 CNOT11Q9UKZ1 510 aaKnown RBP17.85■□□□□ 0.45
SGCE-207ENST00000447873 WIF1Q9Y5W5 379 aa17.85■□□□□ 0.45
SGCE-207ENST00000447873 LAMA5O15230 3695 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 J3KTA2 159 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 OIP5O43482 229 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 CEACAM4O75871 244 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 OR1C1Q15619 314 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 SPINK14Q6IE38 97 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 OR2T5Q6IEZ7 315 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 PSD4Q8NDX1 1056 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 OR2T29Q8NH02 315 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 ARSGQ96EG1 525 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 PIP5K1AQ99755 562 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 BDH2Q9BUT1 245 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 ANGPTL4Q9BY76 406 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 SEMA6AQ9H2E6 1030 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 HHATLQ9HCP6 504 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 TIMMDC1Q9NPL8 285 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 DNAJB9Q9UBS3 223 aa17.84■□□□□ 0.45
SGCE-207ENST00000447873 ANKRD33BA6NCL7 494 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 OR5H15A6NDH6 313 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 CPSF4LA6NMK7 179 aaKnown RBP17.83■□□□□ 0.45
SGCE-207ENST00000447873 C17orf51A8MQB3 221 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 ADAM10O14672 748 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 GMFGO60234 142 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 TPST2O60704 377 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 FMO6PO60774 539 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 SEMA7AO75326 666 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 NEURL1O76050 574 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 UQCRBP14927 111 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 IFNA8P32881 189 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 ACAA2P42765 397 aaKnown RBP17.83■□□□□ 0.45
SGCE-207ENST00000447873 SESN3P58005 492 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 TAS2R41P59536 307 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 ARG2P78540 354 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 SLC34A1Q06495 639 aa17.83■□□□□ 0.45
SGCE-207ENST00000447873 PIN1Q13526 163 aaPredicted RBP17.83■□□□□ 0.45
SGCE-207ENST00000447873 ENTPD8Q5MY95 495 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms