RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PRKACGP22612 351 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 CBLP22681 906 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 IGFBP5P24593 272 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ACAA2P42765 397 aaKnown RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 TMED10P49755 219 aaKnown RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 DAPP51397 102 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 FBXW4P57775 412 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 SMIM11AP58511 58 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 Q0VFX4 171 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ST3GAL3Q11203 375 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 EPS8Q12929 822 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 CHAF1BQ13112 559 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 SKP2Q13309 424 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ATP1A4Q13733 1029 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 EFR3AQ14156 821 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 SEC23BQ15437 767 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 MICAQ29983 383 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 RSPO4Q2I0M5 234 aaPredicted RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 NHSL2Q5HYW2 709 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 C6orf52Q5T4I8 152 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 WLSQ5T9L3 541 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 KDM4DQ6B0I6 523 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ZNF770Q6IQ21 691 aaPredicted RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 LYPD8Q6UX82 237 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 APOOLQ6UXV4 268 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ZNF550Q7Z398 422 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 GDF7Q7Z4P5 450 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 CHERPQ8IWX8 916 aaKnown RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 ZNF440Q8IYI8 595 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ARMC10Q8N2F6 343 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 SLC5A8Q8N695 610 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 SLC15A4Q8N697 577 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 IL22RA1Q8N6P7 574 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ATG16L2Q8NAA4 619 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 GATSQ8NAP1 163 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 POGLUT1Q8NBL1 392 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 OR9Q2Q8NGE9 314 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 SLC7A13Q8TCU3 470 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 GIPC3Q8TF64 312 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 RNF138Q8WVD3 245 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 HGDQ93099 445 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 KIAA1143Q96AT1 154 aaPredicted RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 ARSGQ96EG1 525 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 SLC41A3Q96GZ6 507 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 NAF1Q96HR8 494 aaKnown RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 ALPK1Q96QP1 1244 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 RASL10BQ96S79 203 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 MBOAT4Q96T53 435 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ADI1Q9BV57 179 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 PRR14Q9BWN1 585 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 OSBPL11Q9BXB4 747 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 TBL1XR1Q9BZK7 514 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 RTN4RQ9BZR6 473 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 Q9H521 79 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 ANKRD19PQ9H560 264 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 GPN2Q9H9Y4 310 aaPredicted RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 EXOSC3Q9NQT5 275 aaKnown RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 KRT84Q9NSB2 600 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 IL17BQ9UHF5 180 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 TMCC3Q9ULS5 477 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 RIF1Q5UIP0 2472 aaKnown RBP6.1□□□□□ -1.43
VPS41-204ENST00000413141 CEP250Q9BV73 2442 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 FAM186AA6NE01 2351 aa6.1□□□□□ -1.43
VPS41-204ENST00000413141 A0A0B4J2E0 115 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 A0A1B0GX12 115 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 SH3PXD2BA1X283 911 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 TRAPPC13A5PLN9 417 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 C17orf51A8MQB3 221 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 H3BNH8 94 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 MASP2O00187 686 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 ZNF264O43296 627 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 OIP5O43482 229 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 DENRO43583 198 aaKnown RBP6.09□□□□□ -1.43
VPS41-204ENST00000413141 NDUFB5O43674 189 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 SCO2O43819 266 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 FADS1O60427 444 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 MAN1A2O60476 641 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 MITFO75030 526 aaPredicted RBP6.09□□□□□ -1.43
VPS41-204ENST00000413141 ITGA10O75578 1167 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 CYP7B1O75881 506 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 LYPD3O95274 346 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 NTN1O95631 604 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 ADAP00813 363 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 SERPINA7P05543 415 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 ITGAMP11215 1152 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 ICAM2P13598 275 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 ANXA8P13928 327 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 LIFP15018 202 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 IFNA8P32881 189 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 CAPGP40121 348 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 SOX3P41225 446 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 RAD23AP54725 363 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 MLF1P58340 268 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 ZNF117Q03924 483 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 MERTKQ12866 999 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 KCNAB2Q13303 367 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 RTP5Q14D33 572 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 TRAM2Q15035 370 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 TGIF1Q15583 401 aa6.09□□□□□ -1.43
VPS41-204ENST00000413141 OR1Q1Q15612 314 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms