RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 OR8J2Q8NGG1 315 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 BPIFA2Q96DR5 249 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 MALSU1Q96EH3 234 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ACPTQ9BZG2 426 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 OR2S2Q9NQN1 319 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 H3BML4 177 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SDC3O75056 442 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SEC14L2O76054 403 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 EDN1P05305 212 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 RPS17P08708 135 aaKnown RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 TUBG1P23258 451 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 RAB5BP61020 215 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 WBP2NLQ6ICG8 309 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 C5orf46Q6UWT4 87 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LANCL3Q6ZV70 420 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF767PQ75MW2 155 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LRRTM3Q86VH5 581 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 OR56B2PQ8NGI1 322 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 MOCOSQ96EN8 888 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 TPSD1Q9BZJ3 242 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SOX17Q9H6I2 414 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 GPR45Q9Y5Y3 372 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 F5H5K5 113 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CHRNB4P30926 498 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CXCL12P48061 93 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 EIF2B1Q14232 305 aaKnown RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 DCST2Q5T1A1 773 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 NLGN4XQ8N0W4 816 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 KDM1BQ8NB78 822 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 B3GNT7Q8NFL0 401 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 STEAP2Q8NFT2 490 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 OR9K2Q8NGE7 335 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CCNL2Q96S94 520 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 TESQ9UGI8 421 aaKnown RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ANKRD33BA6NCL7 494 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 HIST1H1TP22492 207 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 RRAS2P62070 204 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 FAM182AQ5T1J6 154 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 AKR1C8PQ5T2L2 129 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 GARNL3Q5VVW2 1013 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LYSMD4Q5XG99 296 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM184AQ6ZMB5 413 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CSNK2A3Q8NEV1 391 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ASB11Q8WXH4 323 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 BORCS7Q96B45 105 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CHRDQ9H2X0 955 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SLA2Q9H6Q3 261 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 USP36Q9P275 1121 aaKnown RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ZNFX1Q9P2E3 1918 aaKnown RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 C2orf72A6NCS6 295 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 RAB40ALP0C0E4 278 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CD79AP11912 226 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 FUT1P19526 365 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CD38P28907 300 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 GRPRP30550 384 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CTHP32929 405 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 VASPP50552 380 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 IRF4Q15306 451 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 PAGE3Q5JUK9 113 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF691Q5VV52 312 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 GTPBP8Q8N3Z3 284 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 RAB40AQ8WXH6 277 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 FGF13Q92913 245 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SHISA4Q96DD7 197 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SLC25A44Q96H78 314 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 EBF1Q9UH73 591 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ACAD8Q9UKU7 415 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 RREB1Q92766 1687 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 TP53P04637 393 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 FOSL2P15408 326 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SDC1P18827 310 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 AOAHP28039 575 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CST5P28325 142 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CSNK1A1P48729 337 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 POU3F4P49335 361 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SGSHP51688 502 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF140P52738 457 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LSAMPQ13449 338 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 GPR149Q86SP6 731 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 NKX2-4Q9H2Z4 354 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 NGBQ9NPG2 151 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 MAN2C1Q9NTJ4 1040 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM100Q9NV29 134 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ADAM29Q9UKF5 820 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 DOCK1Q14185 1865 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 LDB3O75112 727 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 TFP02787 698 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 AKAIN1P0CW23 69 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 TNFRSF1BP20333 461 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 CCR7P32248 378 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 IL13RA1P78552 427 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 IER5LQ5T953 404 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 ANKRD54Q6NXT1 300 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 OR5D16Q8NGK9 328 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 OR6F1Q8NGZ6 308 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SGCZQ96LD1 299 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 SFXN2Q96NB2 322 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 RLIMQ9NVW2 624 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 C5AR2Q9P296 337 aa5.13□□□□□ -1.59
VPS13C-204ENST00000395898 BOKQ9UMX3 212 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms