RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MFSD13AQ14CX5 517 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 AGBL4Q5VU57 503 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 DLEU7Q6UYE1 221 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 Q6ZPB1 254 aaPredicted RBP15.5■□□□□ 0.07
SCN3B-202ENST00000392770 ELP5Q8TE02 316 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 BCL7BQ9BQE9 202 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 ARHGAP9Q9BRR9 750 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 DDX31Q9H8H2 851 aaKnown RBP15.5■□□□□ 0.07
SCN3B-202ENST00000392770 KIF13BQ9NQT8 1826 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 OR1D5P58170 312 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 HMBOX1Q6NT76 420 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.5■□□□□ 0.07
SCN3B-202ENST00000392770 CRHBPP24387 322 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 TSFMP43897 325 aaKnown RBP15.5■□□□□ 0.07
SCN3B-202ENST00000392770 AP2S1P53680 142 aaPredicted RBP15.5■□□□□ 0.07
SCN3B-202ENST00000392770 MS4A15Q8N5U1 240 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 C2CD4DB7Z1M9 353 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 RAB40BQ12829 278 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 PGGHGQ32M88 737 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 FIP1L1Q6UN15 594 aaKnown RBP15.5■□□□□ 0.07
SCN3B-202ENST00000392770 SLC37A2Q8TED4 501 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 OR52A5Q9H2C5 316 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 A6NHS1 94 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 RAB3BP20337 219 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 DCAF7P61962 342 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 OCLNQ16625 522 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 ULBP3Q9BZM4 244 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 OR10A5Q9H207 317 aa15.5■□□□□ 0.07
SCN3B-202ENST00000392770 METTL8Q9H825 291 aaKnown RBP15.5■□□□□ 0.07
SCN3B-202ENST00000392770 ZNF28P17035 718 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 OPRD1P41143 372 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 HTR3AP46098 478 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 EMX1Q04741 257 aaPredicted RBP15.49■□□□□ 0.07
SCN3B-202ENST00000392770 NKAPLQ5M9Q1 402 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 LILRA6Q6PI73 481 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 BAIAP2L2Q6UXY1 529 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 MMP21Q8N119 569 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 GGHQ92820 318 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 EDAQ92838 391 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 MRGPRX1Q96LB2 322 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 CITED4Q96RK1 184 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 PCDHGA10Q9Y5H3 936 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 A0A1B0GTW7 788 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 TLCD2A6NGC4 264 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 CTBP2P56545 445 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 ACOT12Q8WYK0 555 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 SLC6A5Q9Y345 797 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 CEPT1Q9Y6K0 416 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 TNS1Q9HBL0 1735 aaKnown RBP15.49■□□□□ 0.07
SCN3B-202ENST00000392770 PRKYO43930 277 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 CHMP24386 653 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 BMXP51813 675 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 C1orf53Q5VUE5 145 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 TBPL2Q6SJ96 375 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 SYNPOQ8N3V7 929 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 BEX2Q9BXY8 128 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 BEX1Q9HBH7 125 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 PCDHB16Q9NRJ7 776 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 CARD8Q9Y2G2 431 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 OR5K3A6NET4 321 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 A6NIZ1 184 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 RAP1BP61224 184 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 RAP1AP62834 184 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 GPR19Q15760 415 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 MS4A6EQ96DS6 147 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 MKRN2Q9H000 416 aaKnown RBP15.49■□□□□ 0.07
SCN3B-202ENST00000392770 CRISPLD2Q9H0B8 497 aa15.49■□□□□ 0.07
SCN3B-202ENST00000392770 DHCR7Q9UBM7 475 aaKnown RBP15.49■□□□□ 0.07
SCN3B-202ENST00000392770 C14orf166Q9Y224 244 aaKnown RBP15.49■□□□□ 0.07
SCN3B-202ENST00000392770 ACOT7O00154 380 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 BCAS1O75363 584 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-202ENST00000392770 CRABP1P29762 137 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 ARRB2P32121 409 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 FRMPD2BQ6IN97 320 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 TMEM151AQ8N4L1 468 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 NLGN4YQ8NFZ3 816 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-202ENST00000392770 TMEM38AQ9H6F2 299 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 GAREM1Q9H706 876 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 CCDC59Q9P031 241 aaKnown RBP15.48■□□□□ 0.07
SCN3B-202ENST00000392770 CXorf51AA0A1B0GTR3 108 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 UCHL1P09936 223 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 RAB2AP61019 212 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 NKX3-2P78367 333 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 OR5M10Q6IEU7 315 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 GYPBP06028 91 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 DCNP07585 359 aaKnown RBP15.48■□□□□ 0.07
SCN3B-202ENST00000392770 B4GALNT1Q00973 533 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 HYAL1Q12794 435 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 KLHL15Q96M94 604 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 OR51E2Q9H255 320 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 SPHK1Q9NYA1 384 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 GTF2F2P13984 249 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 MRPL49Q13405 166 aaKnown RBP15.48■□□□□ 0.07
SCN3B-202ENST00000392770 GAB1Q13480 694 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 C14orf28Q4W4Y0 310 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 SPIN3Q5JUX0 258 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 MEPCEQ7L2J0 689 aaKnown RBP15.48■□□□□ 0.07
SCN3B-202ENST00000392770 SYT14Q8NB59 555 aa15.48■□□□□ 0.07
SCN3B-202ENST00000392770 CNOT2Q9NZN8 540 aaKnown RBP15.48■□□□□ 0.07
SCN3B-202ENST00000392770 MBD2Q9UBB5 411 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms