RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CPEP16870 476 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 HTR4Q13639 388 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 DUSP6Q16828 381 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 GATSQ8NAP1 163 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 OR4M1Q8NGD0 313 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ZNF417Q8TAU3 575 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 TMEM43Q9BTV4 400 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SDHAF2Q9NX18 166 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 PGAP2Q9UHJ9 254 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 PPT2Q9UMR5 302 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 TSPAN15O95858 294 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SHC1P29353 583 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 GLP1RP43220 463 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 PRKCZQ05513 592 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SYPL1Q16563 259 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ZNF565Q8N9K5 539 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SCLYQ96I15 445 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 PELOQ9BRX2 385 aaKnown RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 TMEM121BQ9BXQ6 578 aaPredicted RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 CCDC86Q9H6F5 360 aaKnown RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 FANCFQ9NPI8 374 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 NDUFB2O95178 105 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 RAB40ALP0C0E4 278 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 POLR2CP19387 275 aaPredicted RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 RPS15AP62244 130 aaKnown RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 DYRK1AQ13627 763 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 GPR176Q14439 515 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 GXYLT1Q4G148 440 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 VRK2Q86Y07 508 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 RAB40AQ8WXH6 277 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 DCLRE1CQ96SD1 692 aaKnown RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 AHSA1O95433 338 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 VEGFCP49767 419 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 HERV-K104P61576 105 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 OTOP2Q7RTS6 562 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 OR5M3Q8NGP4 307 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SLC38A5Q8WUX1 472 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 C1GALT1Q9NS00 363 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SLC9B1P1A6NJY1 282 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 HHLA1C9JL84 531 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 FXYD1O00168 92 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SYPP08247 313 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 TAS2R31P59538 309 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 P2RY14Q15391 338 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SLC18B1Q6NT16 456 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SLC29A4Q7RTT9 530 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 TCTE3Q8IZS6 198 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 OR10K1Q8NGX5 313 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 FIBINQ8TAL6 211 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SCARB1Q8WTV0 552 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SLC38A1Q9H2H9 487 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ZNF701Q9NV72 531 aaPredicted RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 RLIMQ9NVW2 624 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ZNF226Q9NYT6 803 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ZNF443Q9Y2A4 671 aaPredicted RBP13.11□□□□□ -0.31
SMC5-201ENST00000361138 ITGB4P16144 1822 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ZNF736B4DX44 427 aaPredicted RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 CSF3P09919 207 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 HOXC5Q00444 222 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 HYAL2Q12891 473 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 RBMS2Q15434 407 aaKnown RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 CLPPQ16740 277 aaPredicted RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 PRRT3Q5FWE3 981 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 C18orf63Q68DL7 685 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 PGAP1Q75T13 922 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 UQCC2Q9BRT2 126 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 SLIRPQ9GZT3 109 aaKnown RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 TMEM38AQ9H6F2 299 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 A4GALTQ9NPC4 353 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 KIF13BQ9NQT8 1826 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 MBLAC1A4D2B0 266 aaPredicted RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 FOXE1O00358 373 aaPredicted RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 HSPA12AO43301 675 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 SDC3O75056 442 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 IFNA2P01563 188 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 CLDN20P56880 219 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 OR7G2Q8NG99 324 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 OR2T4Q8NH00 348 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 DOK4Q8TEW6 326 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 ZBTB8AQ96BR9 441 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 SERINC1Q9NRX5 453 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 H0YIV9 168 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 SOX1O00570 391 aaPredicted RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 AKR7A2O43488 359 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 RAF1P04049 648 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 CAPZA1P52907 286 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 CD300CQ08708 224 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 OR4N5Q8IXE1 308 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 ALOXE3Q9BYJ1 711 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 HMGN2P05204 90 aaKnown RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 MMP2P08253 660 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 ZNF35P13682 527 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 S100PP25815 95 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 S100A11P31949 105 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms