RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CYP7B1O75881 506 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 DIRAS1O95057 198 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 UBL4AP11441 157 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 FUT4P22083 530 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 PSMA4P25789 261 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 YAP1P46937 504 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 ZNF117Q03924 483 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 CHRNB3Q05901 458 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 OR1C1Q15619 314 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 FAM98BQ52LJ0 330 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 SLC22A10Q63ZE4 541 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 OR5M10Q6IEU7 315 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 BORAQ6PGQ7 559 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 GRAMD2AQ8IUY3 354 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 MDS2Q8NDY4 140 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 DUSP19Q8WTR2 217 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 SNRNP27Q8WVK2 155 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 GEMIN6Q8WXD5 167 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 ZNF524Q96C55 264 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 SH3YL1Q96HL8 342 aaPredicted RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 SECISBP2Q96T21 854 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 SMAD5Q99717 465 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 CHID1Q9BWS9 393 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 OSBPL11Q9BXB4 747 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 ANGPTL4Q9BY76 406 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 DEPPQ9NTK1 212 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 RYDENQ9NUL5 291 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 KLRF1Q9NZS2 232 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 SLC35A3Q9Y2D2 325 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 OR5H15A6NDH6 313 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 J3KTA2 159 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 K7EM74 188 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 AP3D1O14617 1153 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 GMFGO60234 142 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 TIPRLO75663 272 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 PDGFAP04085 211 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 RAP2AP10114 183 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 CD97P48960 835 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 SKP2Q13309 424 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 EIPR1Q53HC9 387 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 TBCELQ5QJ74 424 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 TMEM81Q6P7N7 255 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 CMIPQ8IY22 773 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 PSD4Q8NDX1 1056 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 HAS2Q92819 552 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 EXTL1Q92935 676 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 RNF32Q9H0A6 362 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 IL1RAPQ9NPH3 570 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 NDUFAF4Q9P032 175 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 SLC13A4Q9UKG4 626 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 AP4S1Q9Y587 144 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 CNTRLQ7Z7A1 2325 aa17.35■□□□□ 0.37
CHMP4A-201ENST00000347519 ANKRD11Q6UB99 2663 aaPredicted RBP17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 PINLYPA6NC86 204 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 GTPBP1O00178 669 aaKnown RBP17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 ZNF264O43296 627 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 HTR2AP28223 471 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 CASRP41180 1078 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 ACAA2P42765 397 aaKnown RBP17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 MAGEA2P43356 314 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 DNASE1L1P49184 302 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 RGS8P57771 180 aaPredicted RBP17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 ZDHHC21Q8IVQ6 265 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 LAT2Q9GZY6 243 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 CTPS2Q9NRF8 586 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 ARMC1Q9NVT9 282 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 KLHL28Q9NXS3 571 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 CNIH4Q9P003 139 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 WIF1Q9Y5W5 379 aa17.34■□□□□ 0.37
CHMP4A-201ENST00000347519 MGAQ8IWI9 3026 aa17.33■□□□□ 0.37
CHMP4A-201ENST00000347519 NCKAP5O14513 1909 aa17.33■□□□□ 0.37
CHMP4A-201ENST00000347519 H0Y3Z8 333 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 H3BNH8 94 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 IFNW1P05000 195 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 FABP3P05413 133 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 CLK3P49761 638 aaKnown RBP17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 GPR85P60893 370 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 RPP38P78345 283 aaKnown RBP17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 ARG2P78540 354 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 KCNC4Q03721 635 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 SLC30A6Q6NXT4 461 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 DEF8Q6ZN54 512 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 LILRA2Q8N149 483 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 WDSUB1Q8N9V3 476 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 PHF10Q8WUB8 498 aaKnown RBP17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 FRMD6Q96NE9 622 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 TIMMDC1Q9NPL8 285 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 SACM1LQ9NTJ5 587 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 MED11Q9P086 117 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 ICAM5Q9UMF0 924 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 SLC9A8Q9Y2E8 581 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 ENPP4Q9Y6X5 453 aa17.33■□□□□ 0.36
CHMP4A-201ENST00000347519 ANKRD33BA6NCL7 494 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 GNB5O14775 395 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 FFAR1O14842 300 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 HCRTR2O43614 444 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 MGRN1O60291 552 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 SLC25A12O75746 678 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 P04436 131 aa17.32■□□□□ 0.36
CHMP4A-201ENST00000347519 RYKP34925 604 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms