RNA–Protein interactions for RNA: ENST00000340027.9

NCR3-201, Transcript of natural cytotoxicity triggering receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCR3, Length 1,042 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCR3-201ENST00000340027 RNF217Q8TC41 542 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 HAS2Q92819 552 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 SLC35B4Q969S0 331 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 DUS3LQ96G46 650 aaKnown RBP13.68□□□□□ -0.22
NCR3-201ENST00000340027 ZNF347Q96SE7 839 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 MCHR1Q99705 422 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 ZNF559Q9BR84 538 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 ANGPTL4Q9BY76 406 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 PTGES2Q9H7Z7 377 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 TMEM27Q9HBJ8 222 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 GALNT9Q9HCQ5 603 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 IL1RAPQ9NPH3 570 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 ARMC1Q9NVT9 282 aa13.68□□□□□ -0.22
NCR3-201ENST00000340027 DNAJB12Q9NXW2 375 aaKnown RBP13.68□□□□□ -0.22
NCR3-201ENST00000340027 TESQ9UGI8 421 aaKnown RBP13.68□□□□□ -0.22
NCR3-201ENST00000340027 CNOT11Q9UKZ1 510 aaKnown RBP13.68□□□□□ -0.22
NCR3-201ENST00000340027 ANKRD33BA6NCL7 494 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 G3V3Y1 287 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 KLRC4-KLRK1H3BQV0 150 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 TAF4O00268 1085 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 GNB5O14775 395 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 TIPRLO75663 272 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 MT-ND1P03886 318 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 PGCP20142 388 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 MSX1P28360 303 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 YAP1P46937 504 aaKnown RBP13.67□□□□□ -0.22
NCR3-201ENST00000340027 TAS2R41P59536 307 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 NDUFAF6Q330K2 333 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 OR5M10Q6IEU7 315 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 PLEKHM3Q6ZWE6 761 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 MDGA2Q7Z553 956 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 TMEM178AQ8NBL3 297 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 OR6T1Q8NGN1 323 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 OR1J4Q8NGS1 313 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 NR4A3Q92570 626 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 SIGLEC12Q96PQ1 595 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 SMAD5Q99717 465 aaKnown RBP13.67□□□□□ -0.22
NCR3-201ENST00000340027 AMBRA1Q9C0C7 1298 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 DCLRE1BQ9H816 532 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 EXOSC3Q9NQT5 275 aaKnown RBP13.67□□□□□ -0.22
NCR3-201ENST00000340027 KLHL1Q9NR64 748 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 KLF13Q9Y2Y9 288 aaPredicted RBP13.67□□□□□ -0.22
NCR3-201ENST00000340027 PCDHGB7Q9Y5F8 929 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 PCDHGA9Q9Y5G4 932 aaKnown RBP13.67□□□□□ -0.22
NCR3-201ENST00000340027 ENPP4Q9Y6X5 453 aa13.67□□□□□ -0.22
NCR3-201ENST00000340027 CPSF4LA6NMK7 179 aaKnown RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 ITGB2P05107 769 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 SP1P08047 785 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 RHCEP18577 417 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 ZNF41P51814 821 aaPredicted RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 VLDLRP98155 873 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 HOXC5Q00444 222 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 ZNF117Q03924 483 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 RCN1Q15293 331 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 COL28A1Q2UY09 1125 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 ZNF766Q5HY98 468 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 FNDC7Q5VTL7 733 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 LACC1Q8IV20 430 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 CADM2Q8N3J6 435 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 KDF1Q8NAX2 398 aaPredicted RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 FAM98AQ8NCA5 519 aaKnown RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 PAPD5Q8NDF8 572 aaKnown RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 OR5W2Q8NH69 310 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 EXTL1Q92935 676 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 SLCO4A1Q96BD0 722 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 ZNF597Q96LX8 424 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 ZNF300Q96RE9 604 aaPredicted RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 FAM173AQ9BQD7 235 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 FNDC11Q9BVV2 318 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 TRIM2Q9C040 744 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 POLR2J2Q9GZM3 115 aaKnown RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 MED11Q9P086 117 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 BOKQ9UMX3 212 aaPredicted RBP13.66□□□□□ -0.22
NCR3-201ENST00000340027 AKAP13Q12802 2813 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 SPTBN4Q9H254 2564 aa13.66□□□□□ -0.22
NCR3-201ENST00000340027 TMEM229AB2RXF0 380 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 ADAMDEC1O15204 470 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 NEURL1O76050 574 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 EPPINO95925 133 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 LDLRP01130 860 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 SEMG1P04279 462 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 PTGDSP41222 190 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 DNASE1L1P49184 302 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 ARHGDIAP52565 204 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 SUMO3P55854 103 aaPredicted RBP13.65□□□□□ -0.22
NCR3-201ENST00000340027 SMIM11AP58511 58 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 GPR85P60893 370 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 SPIBQ01892 262 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 PLGLB1Q02325 96 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 EPS8Q12929 822 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 FOXD4Q12950 439 aaPredicted RBP13.65□□□□□ -0.22
NCR3-201ENST00000340027 SKP2Q13309 424 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 TOMM20Q15388 145 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 ENTPD8Q5MY95 495 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 CBLN3Q6UW01 205 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 IGFL2Q6UWQ7 119 aa13.65□□□□□ -0.22
NCR3-201ENST00000340027 PIWIL3Q7Z3Z3 882 aaKnown RBP13.65□□□□□ -0.22
NCR3-201ENST00000340027 PLCZ1Q86YW0 608 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms