RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 Q9H521 79 aa13.54□□□□□ -0.24
CDK5RAP3-201ENST00000338399 EVA1AQ9H8M9 152 aa13.54□□□□□ -0.24
CDK5RAP3-201ENST00000338399 P4HTMQ9NXG6 502 aa13.54□□□□□ -0.24
CDK5RAP3-201ENST00000338399 LRCH1Q9Y2L9 728 aa13.54□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ORC6Q9Y5N6 252 aa13.54□□□□□ -0.24
CDK5RAP3-201ENST00000338399 OR5F1O95221 314 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 HPP00738 406 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 THY1P04216 161 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 RYKP34925 604 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ACAA2P42765 397 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 MED21Q13503 144 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CMPK2Q5EBM0 449 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 PODNL1Q6PEZ8 512 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ZNF550Q7Z398 422 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 GDF7Q7Z4P5 450 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 MARCH3Q86UD3 253 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 SLC22A8Q8TCC7 542 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TFAP2CQ92754 450 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NACC2Q96BF6 587 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 RASL10BQ96S79 203 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ZNF559Q9BR84 538 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 RTN4RQ9BZR6 473 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 FAM117AQ9C073 453 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TOR3AQ9H497 397 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 WDR70Q9NW82 654 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 SH3PXD2BA1X283 911 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 GTPBP1O00178 669 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 FAAHO00519 579 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 OIP5O43482 229 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 DENRO43583 198 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 FMO6PO60774 539 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NGFRP08138 427 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ITGAMP11215 1152 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 UBL4AP11441 157 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 ANXA8P13928 327 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 EVI2BP34910 448 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 EFR3AQ14156 821 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TRAM2Q15035 370 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 FCRLBQ6BAA4 426 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 MRGPREQ86SM8 312 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 RAB43Q86YS6 212 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NKAIN4Q8IVV8 208 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 POGLUT1Q8NBL1 392 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 SLC35B4Q969S0 331 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CNBD2Q96M20 576 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 RDH12Q96NR8 316 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NODALQ96S42 347 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 NIPSNAP1Q9BPW8 284 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 TBL1XR1Q9BZK7 514 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 KRT84Q9NSB2 600 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 SLC7A7Q9UM01 511 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 CARD8Q9Y2G2 431 aa13.53□□□□□ -0.24
CDK5RAP3-201ENST00000338399 A0A1W2PQD3 144 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TRAPPC13A5PLN9 417 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ALG1L2C9J202 215 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 H3BNH8 94 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SCO2O43819 266 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 OR10H3O60404 316 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 FADS1O60427 444 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MAN1A2O60476 641 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ITGA10O75578 1167 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 NTN1O95631 604 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GASTP01350 101 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RPSAP08865 295 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ICAM2P13598 275 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 POU2F1P14859 743 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 NAGAP17050 411 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ST13P50502 369 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RAD23AP54725 363 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LSM11P83369 360 aaKnown RBP eCLIP13.52□□□□□ -0.253e-9■■□□□ 12.5
CDK5RAP3-201ENST00000338399 Q0VFX4 171 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ATP1A4Q13733 1029 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SLC36A3Q495N2 470 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF770Q6IQ21 691 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 IGF2-ASQ6U949 168 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LYPD8Q6UX82 237 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 LSRQ86X29 649 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 AQP11Q8NBQ7 271 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 FAM71CQ8NEG0 241 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 HGDQ93099 445 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SLC38A4Q969I6 547 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MBOAT4Q96T53 435 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PSD2Q9BQI7 771 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 POLR2J2Q9GZM3 115 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 POLR2J3Q9H1A7 115 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CDCP1Q9H5V8 836 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GPN2Q9H9Y4 310 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TMEM27Q9HBJ8 222 aa13.52□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ARRDC5A6NEK1 342 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF264O43296 627 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 NDUFB5O43674 189 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CBLP22681 906 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CAPGP40121 348 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TMED10P49755 219 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ADARB1P78563 741 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 EPS8Q12929 822 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 KCNAB2Q13303 367 aa13.51□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SKP2Q13309 424 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms