RNA–Protein interactions for RNA: ENST00000332149.9

TMPRSS2-201, Transcript of transmembrane serine protease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMPRSS2, Length 3,205 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS2-201ENST00000332149 SYT16Q17RD7 645 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 WDR88Q6ZMY6 472 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 SZRD1Q7Z422 152 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 NKAIN4Q8IVV8 208 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 TMEM151BQ8IW70 566 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 SLC34A3Q8N130 599 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 LNX2Q8N448 690 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 SGCDQ92629 289 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 GTPBP3Q969Y2 492 aaKnown RBP13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 VN1R1Q9GZP7 353 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 UBQLN4Q9NRR5 601 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 NUP214P35658 2090 aaPredicted RBP13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 HRKO00198 91 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 BHLHE40O14503 412 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 XPNPEP2O43895 674 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 HMGN1P05114 100 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 SLC6A8P48029 635 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 SLC27A4Q6P1M0 643 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 P3H2Q8IVL5 708 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 ZNF540Q8NDQ6 660 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 TMEM239Q8WW34 195 aa13.22□□□□□ -0.29
TMPRSS2-201ENST00000332149 SAGE2PA6NJ88 616 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 STK25O00506 426 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 DKK1O94907 266 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 INHBBP09529 407 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 FXYD6P3P58550 94 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 RPS4XP62701 263 aaKnown RBP13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 RAB40BQ12829 278 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 KCNAB1Q14722 419 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 ULK3Q6PHR2 472 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 MISPQ8IVT2 679 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 ZNF527Q8NB42 609 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 ZNF485Q8NCK3 441 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 CCDC74BQ96LY2 380 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 ADAM19Q9H013 955 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 GAREM1Q9H706 876 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 SLC7A7Q9UM01 511 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 A0A087WUJ7 227 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 D6RAR5 112 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 IMPA2O14732 288 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 PRODHO43272 600 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 IGHA1P01876 353 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 DBTP11182 482 aaKnown RBP13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 CSTF2P33240 577 aaKnown RBP eCLIP13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 PEX19P40855 299 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 ARL4DP49703 201 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 DYNC1I2Q13409 638 aaKnown RBP13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 ZNF267Q14586 743 aaPredicted RBP13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 PGGHGQ32M88 737 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 CCNJQ5T5M9 372 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 TTLL10Q6ZVT0 673 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 SLC46A3Q7Z3Q1 461 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 OTUB1Q96FW1 271 aaPredicted RBP13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 TMEM27Q9HBJ8 222 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 HAO2Q9NYQ3 351 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 NTNG1Q9Y2I2 539 aa13.21□□□□□ -0.29
TMPRSS2-201ENST00000332149 ALG1L2C9J202 215 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 RPLP0P05388 317 aaKnown RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 STSP08842 583 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 SYT14P1Q58G82 188 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 GDPGP1Q6ZNW5 385 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 Q6ZPB1 254 aaPredicted RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 C9orf40Q8IXQ3 194 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 SLC15A4Q8N697 577 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 B3GNT7Q8NFL0 401 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 IFI44Q8TCB0 444 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 RORBQ92753 470 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 ZNF582Q96NG8 517 aaPredicted RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 YIPF3Q9GZM5 350 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 NXF2Q9GZY0 626 aaKnown RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 WDR70Q9NW82 654 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 IMPAD1Q9NX62 359 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 PCDHGA3Q9Y5H0 932 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 TMEM129A0AVI4 362 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 UNC119BA6NIH7 251 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 CPSF4LA6NMK7 179 aaKnown RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 M0R082 166 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 PPM1BO75688 479 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 CD63P08962 238 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 APEHP13798 732 aaKnown RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 CAPZA2P47755 286 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 SUMO3P55854 103 aaPredicted RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 GPR68Q15743 365 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 SMN1Q16637 294 aaKnown RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 PDZK1Q5T2W1 519 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 ANKRD37Q7Z713 158 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 CLVS1Q8IUQ0 354 aaPredicted RBP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 CACTIN-AS1Q8N1I8 211 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 VMP1Q96GC9 406 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 FUNDC2Q9BWH2 189 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 WWTR1Q9GZV5 400 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 ZGLP1P0C6A0 271 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 PNMTP11086 282 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 GALP22466 123 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 NFATC3Q12968 1075 aa13.2□□□□□ -0.3
TMPRSS2-201ENST00000332149 KLHL22Q53GT1 634 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms