RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 KLHL4Q9C0H6 718 aa7.31□□□□□ -1.24
TPM3-203ENST00000312970 UBQLN4Q9NRR5 601 aa7.31□□□□□ -1.24
TPM3-203ENST00000312970 MID2Q9UJV3 735 aa7.31□□□□□ -1.24
TPM3-203ENST00000312970 VDAC3Q9Y277 283 aa7.31□□□□□ -1.24
TPM3-203ENST00000312970 TMED5Q9Y3A6 229 aa7.31□□□□□ -1.24
TPM3-203ENST00000312970 EMC9Q9Y3B6 208 aa7.31□□□□□ -1.24
TPM3-203ENST00000312970 FIS1Q9Y3D6 152 aa7.31□□□□□ -1.24
TPM3-203ENST00000312970 DNAJC15Q9Y5T4 150 aa7.31□□□□□ -1.24
TPM3-203ENST00000312970 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 UQCRHLA0A096LP55 91 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 A0A096LPE4 126 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 TRAV20A0A0B4J274 112 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 A0A1W2PPZ6 126 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 SMIM23A6NLE4 172 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 LSM1O15116 133 aaKnown RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 ADAMDEC1O15204 470 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 SIAH2O43255 324 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 AQP8O94778 261 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 KCNK2O95069 426 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 SYNGR4O95473 234 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 OXSR1O95747 527 aaPredicted RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 HSPA4LO95757 839 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 PLGP00747 810 aaPredicted RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 INHBBP09529 407 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ALOX5P09917 674 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ACP2P11117 423 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 BCKDHAP12694 445 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 PPP3CBP16298 524 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ZNF17P17021 662 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 SDC1P18827 310 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ASMTP46597 345 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ZNF41P51814 821 aaPredicted RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 CTBP2P56545 445 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 RAC1P63000 192 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 PDE7AQ13946 482 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.3□□□□□ -1.24
TPM3-203ENST00000312970 EXOC3L2Q2M3D2 409 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 UGT3A2Q3SY77 523 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ZNF385BQ569K4 471 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 PDSS1Q5T2R2 415 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 KANK2Q63ZY3 851 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ANKRD34AQ69YU3 496 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 GTF2IRD2BQ6EKJ0 949 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 MFSD12Q6NUT3 480 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 FIGNL1Q6PIW4 674 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 PRSS57Q6UWY2 283 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 LRIG3Q6UXM1 1119 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ZNF550Q7Z398 422 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 SZRD1Q7Z422 152 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 R3HCC1LQ7Z5L2 792 aaKnown RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 GALNT10Q86SR1 603 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 GTF2IRD2Q86UP8 949 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 GGNQ86UU5 652 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 KRTAP1-3Q8IUG1 177 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 MISPQ8IVT2 679 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 GSPT2Q8IYD1 628 aaKnown RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 C4orf33Q8N1A6 199 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 GTPBP8Q8N3Z3 284 aaPredicted RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 ANKRD42Q8N9B4 389 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 OR6K3Q8NGY3 331 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 OR10D3Q8NH80 312 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.3□□□□□ -1.241e-8■■■■■ 76.2
TPM3-203ENST00000312970 CAVIN3Q969G5 261 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ZBTB8AQ96BR9 441 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 GIMAP5Q96F15 307 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ZC3HAV1LQ96H79 300 aaKnown RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 GMPPAQ96IJ6 420 aaPredicted RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 MS4A4EQ96PG1 132 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 TUBB1Q9H4B7 451 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 EML4Q9HC35 981 aaKnown RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 FANCFQ9NPI8 374 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 GLRX2Q9NS18 164 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 FBXO34Q9NWN3 711 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 MCTS1Q9ULC4 181 aaKnown RBP7.3□□□□□ -1.24
TPM3-203ENST00000312970 PCDHB10Q9UN67 800 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 TRAF6Q9Y4K3 522 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 PTGDR2Q9Y5Y4 395 aa7.3□□□□□ -1.24
TPM3-203ENST00000312970 ANK3Q12955 4377 aaKnown RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 CUBNO60494 3623 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 A0A1W2PQD3 144 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 A0A1W2PRB8 838 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 C7orf72A4D263 438 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 FAM171A2A8MVW0 826 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 TMEM114B3SHH9 223 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 SCDO00767 359 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 CXCL13O43927 109 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 SS18L1O75177 396 aaPredicted RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 SOX30O94993 753 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 OPN1LWP04000 364 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 ME2P23368 584 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 PSMA4P25789 261 aaKnown RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 RPL3P39023 403 aaKnown RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 EIF1P41567 113 aaKnown RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 SLC6A8P48029 635 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 PRIM2P49643 509 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 CARD18P57730 90 aa7.29□□□□□ -1.24
TPM3-203ENST00000312970 RPL38P63173 70 aaKnown RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 POU6F2P78424 691 aaPredicted RBP7.29□□□□□ -1.24
TPM3-203ENST00000312970 PCLAFQ15004 111 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms