RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Prl8a8Q9DAS4 241 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Entpd4Q9DBT4 613 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Popdc3Q9ES81 291 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Espl1P60330 2118 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Dock2Q8C3J5 1828 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Acbd4E9Q289 327 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cyp4a31F8WGU9 509 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 RfngO09009 332 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rnf13O54965 381 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Tcte3P11985 191 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 GypaP14220 168 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Klhl8P59280 629 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Isl1P61372 349 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Tra2bP62996 288 aaKnown RBP9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rpl10lP86048 214 aaKnown RBP9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Fam105aQ3TVP5 353 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Grxcr2Q3TYR5 254 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 McidasQ3UZ45 379 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Commd6Q3V4B5 87 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ddhd2Q80Y98 699 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zcchc4Q8BKW4 512 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr441Q8VFS5 310 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Wdr6Q99ME2 1125 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cadm3Q99N28 396 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cdca5Q9CPY3 264 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Mrpl49Q9CQ40 166 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Hyal6Q9D4E9 494 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc6a19Q9D687 634 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Kcne5Q9QZ26 143 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ascc3E9PZJ8 2198 aaKnown RBP9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Tsc2Q61037 1814 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr396-ps1A0A0U1RNF5 211 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr1247A2AT78 314 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm13178B1AVU7 408 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Hs3st4D3YVV6 449 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Catsperg1E9Q355 1151 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Pot1bH7BX60 640 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Capns1O88456 269 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gja4P28235 333 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Prdx1P35700 199 aaKnown RBP9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Sox3P53784 375 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rab5bP61021 215 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 UqcrhP99028 89 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Apoc2Q05020 97 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 B3gnt4Q1RLK6 350 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gal3st4Q3V1B8 480 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 CishQ62225 257 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc22a18Q78KK3 406 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Nedd4lQ8CFI0 1004 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc22a6Q8VC69 545 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Arfgap1Q9EPJ9 414 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Spo11Q9WTK8 396 aa9.38□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr316A0A0N4SVP2 306 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm10800D3Z496 220 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Vmn1r25H3BLP0 302 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc28a2O88627 660 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Agtr1bP29755 359 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Tmem69Q3KQJ0 245 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm813Q3UWK9 176 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr318Q5NCD7 306 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Thoc6Q5U4D9 341 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Usf2Q64705 346 aaKnown RBP9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Q8C3W1 322 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 NpntQ91V88 561 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ces2cQ91WG0 561 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Nop16Q9CPT5 178 aaKnown RBP9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Lap3Q9CPY7 519 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Dcdc2cQ9D1B8 347 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Chrnb2Q9ERK7 501 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Spry1Q9QXV9 313 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Srebf1Q9WTN3 1134 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 AgtrapQ9WVK0 161 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rhox2bA2A447 191 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rhox2cA2AWL9 191 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Btbd35f28A2CFD5 498 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Mterf1bB9EJ57 379 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Srp54bE9PXC0 504 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Btbd35f30J3QML3 498 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cd93O89103 644 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gpx5P21765 221 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Hsd17b3P70385 305 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rit1P70426 219 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ikzf1Q03267 517 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Dyrk2Q5U4C9 599 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Foxd3Q61060 465 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Pon2Q62086 354 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Iqcf4Q6P8Y2 204 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ip6k1Q6PD10 433 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Calm5Q6W3E0 140 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Sox11Q7M6Y2 395 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr1197Q7TR13 314 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr1196Q7TR14 314 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Adgrd1Q80T32 903 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 AntxrlQ8BVM2 641 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr135Q8VEY4 312 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr1391Q8VFA4 311 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr815Q8VFU0 316 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc41a3Q921R8 488 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 AireQ9Z0E3 552 aa9.37□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cldn8Q9Z260 225 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms