RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ARRDC1-AS1Q9H2J1 176 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 COPS7AQ9UBW8 275 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 CTSFQ9UBX1 484 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 AASSQ9UDR5 926 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 NPIPB9F8W1W9 429 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 DDAH2O95865 285 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 GKN3PP0CG01 181 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 CSTF2P33240 577 aaKnown RBP eCLIP15.19■□□□□ 0.02
PHGDH-216ENST00000641375 DCAF7P61962 342 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 PMS2P3Q13401 168 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 FGFBP1Q14512 234 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 NEDD8Q15843 81 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 NNATQ16517 81 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 NKAIN1Q4KMZ8 207 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 PRR23CQ6ZRP0 262 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 STT3BQ8TCJ2 826 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 INIPQ9NRY2 104 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 PLCXD1Q9NUJ7 323 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 PAK1IP1Q9NWT1 392 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-216ENST00000641375 MRTO4Q9UKD2 239 aaKnown RBP15.19■□□□□ 0.02
PHGDH-216ENST00000641375 SLC7A7Q9UM01 511 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 NTNG1Q9Y2I2 539 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 PCDHGB2Q9Y5G2 931 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 PCDHGB1Q9Y5G3 927 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 CEPT1Q9Y6K0 416 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 WDFY4Q6ZS81 3184 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 H3BSA7 217 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 SOX14O95416 240 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 GP1BAP07359 652 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 HTR1AP08908 422 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 ZGLP1P0C6A0 271 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 RAB15P59190 212 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 DCDP81605 110 aaKnown RBP15.18■□□□□ 0.02
PHGDH-216ENST00000641375 TSPAN31Q12999 210 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 IL11RAQ14626 422 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 OR1Q1Q15612 314 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 SMN1Q16637 294 aaKnown RBP15.18■□□□□ 0.02
PHGDH-216ENST00000641375 TMEM236Q5W0B7 351 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 MBOAT2Q6ZWT7 520 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 LAPTM4BQ86VI4 370 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 NKAIN4Q8IVV8 208 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 PRSS58Q8IYP2 241 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 SLC38A9Q8NBW4 561 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 SNRNP27Q8WVK2 155 aaKnown RBP15.18■□□□□ 0.02
PHGDH-216ENST00000641375 CCDC90BQ9GZT6 254 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 HOXD1Q9GZZ0 328 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 SLC22A11Q9NSA0 550 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF226Q9NYT6 803 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 FRG2CA6NGY1 282 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 TIAF1O95411 115 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 THY1P04216 161 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 PRG2P13727 222 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 GABRB1P18505 474 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 HTR2AP28223 471 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 EFNA3P52797 238 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 RAB39AQ14964 217 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 SLX4IPQ5VYV7 408 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 LAIR1Q6GTX8 287 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF613Q6PF04 617 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 CASP12Q6UXS9 341 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 PTCHD4Q6ZW05 846 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 NLGN4XQ8N0W4 816 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 TRUB1Q8WWH5 349 aaKnown RBP15.18■□□□□ 0.02
PHGDH-216ENST00000641375 SGCDQ92629 289 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 LCORQ96JN0 433 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-216ENST00000641375 SMOC1Q9H4F8 434 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 TMEM27Q9HBJ8 222 aa15.18■□□□□ 0.02
PHGDH-216ENST00000641375 WDR87Q6ZQQ6 2873 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 LDOC1O95751 146 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-216ENST00000641375 ONECUT2O95948 504 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 TP53P04637 393 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-216ENST00000641375 OMPP47874 163 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 TUBA3CQ13748 450 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 XAF1Q6GPH4 301 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 DBX2Q6ZNG2 339 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 Q6ZNX1 250 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF550Q7Z398 422 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 PRICKLE2Q7Z3G6 844 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 CCDC103Q8IW40 242 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 RNF113BQ8IZP6 322 aaKnown RBP15.17■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF321PQ8N8H1 164 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 OR1N1Q8NGS0 311 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 DNAJB12Q9NXW2 375 aaKnown RBP15.17■□□□□ 0.02
PHGDH-216ENST00000641375 RSL24D1Q9UHA3 163 aaKnown RBP15.17■□□□□ 0.02
PHGDH-216ENST00000641375 C2orf92A0A1B0GVN3 265 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 SH3D21A4FU49 640 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 OR6C76A6NM76 312 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 RGS10O43665 173 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 IL33O95760 270 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 FGF5P12034 268 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 FPR3P25089 353 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 LSM11P83369 360 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHGDH-216ENST00000641375 HLA-DQA1Q5Y7H0 255 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF527Q8NB42 609 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 ZSCAN1Q8NBB4 408 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 AGBL5Q8NDL9 886 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 TMEM255BQ8WV15 326 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 CNOT9Q92600 299 aaKnown RBP15.17■□□□□ 0.02
PHGDH-216ENST00000641375 GPA33Q99795 319 aa15.17■□□□□ 0.02
PHGDH-216ENST00000641375 C11orf16Q9NQ32 467 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms