RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 IGHV1-2P23083 117 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 PSMA4P25789 261 aaKnown RBP12.19□□□□□ -0.46
SNX1-214ENST00000625244 APOBEC3AP31941 199 aaPredicted RBP12.19□□□□□ -0.46
SNX1-214ENST00000625244 LIMS1P48059 325 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 CHN2P52757 468 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 DVL1P1P54792 670 aaPredicted RBP12.19□□□□□ -0.46
SNX1-214ENST00000625244 CARD18P57730 90 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 RAC1P63000 192 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 RNPS1Q15287 305 aaKnown RBP12.19□□□□□ -0.46
SNX1-214ENST00000625244 ZNF628Q5EBL2 1059 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 CYS1Q717R9 158 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 RELL1Q8IUW5 271 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 HPS1Q92902 700 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 MRPL24Q96A35 216 aaKnown RBP12.19□□□□□ -0.46
SNX1-214ENST00000625244 MTBPQ96DY7 904 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 FBXO17Q96EF6 278 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 CNRIP1Q96F85 164 aaPredicted RBP12.19□□□□□ -0.46
SNX1-214ENST00000625244 ZNF681Q96N22 645 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 SRXN1Q9BYN0 137 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 ABCG2Q9UNQ0 655 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 OR10H1Q9Y4A9 318 aa12.19□□□□□ -0.46
SNX1-214ENST00000625244 IGLV3-32A0A0A0MS00 114 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 A0A1W2PR80 420 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 TCRBV9S1A1TA0A576 114 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 H0YIV9 168 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 M0R1B8 84 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 CLDN9O95484 217 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 YES1P07947 543 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 TACSTD2P09758 323 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 ARAFP10398 606 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 SHC1P29353 583 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 SLC12A2P55011 1212 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 PHEXP78562 749 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 CHRNEQ04844 493 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 NAB1Q13506 487 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 SSX8Q7RTT4 187 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 P2RY8Q86VZ1 359 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 GTPBP8Q8N3Z3 284 aaPredicted RBP12.18□□□□□ -0.46
SNX1-214ENST00000625244 SVOPLQ8N434 492 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 OR52N5Q8NH56 324 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 FAM110BQ8TC76 370 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 FBF1Q8TES7 1133 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 KLHL29Q96CT2 875 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 REXO5Q96IC2 774 aaKnown RBP12.18□□□□□ -0.46
SNX1-214ENST00000625244 RNF145Q96MT1 663 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 SNX18Q96RF0 628 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 CDC42EP4Q9H3Q1 356 aaKnown RBP12.18□□□□□ -0.46
SNX1-214ENST00000625244 CAB39LQ9H9S4 337 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 POPDC3Q9HBV1 291 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 MYOZ1Q9NP98 299 aaPredicted RBP12.18□□□□□ -0.46
SNX1-214ENST00000625244 MYNNQ9NPC7 610 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 OPTCQ9UBM4 332 aa12.18□□□□□ -0.46
SNX1-214ENST00000625244 C1orf226A1L170 272 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 FOXE1O00358 373 aaPredicted RBP12.17□□□□□ -0.46
SNX1-214ENST00000625244 BCAS2O75934 225 aaPredicted RBP12.17□□□□□ -0.46
SNX1-214ENST00000625244 ALX3O95076 343 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 STAMBPO95630 424 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 S100BP04271 92 aaPredicted RBP12.17□□□□□ -0.46
SNX1-214ENST00000625244 COX5AP20674 150 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 PCMT1P22061 227 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 ECHS1P30084 290 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 GP5P40197 560 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 OR3A2P47893 321 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 PIK3CGP48736 1102 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 PSPHP78330 225 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 CSTF3Q12996 717 aaKnown RBP12.17□□□□□ -0.46
SNX1-214ENST00000625244 SCGB2A2Q13296 93 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 CPSF6Q16630 551 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX1-214ENST00000625244 CCNYL2Q5T2Q4 361 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 PDSS1Q5T2R2 415 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 KLHL17Q6TDP4 642 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 APOOLQ6UXV4 268 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 TRMT10CQ7L0Y3 403 aaKnown RBP12.17□□□□□ -0.46
SNX1-214ENST00000625244 TEX9Q8N6V9 391 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 WDR20Q8TBZ3 569 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 ZNF675Q8TD23 568 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 CPNE1Q99829 537 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 VRK1Q99986 396 aaPredicted RBP12.17□□□□□ -0.46
SNX1-214ENST00000625244 C1QTNF6Q9BXI9 259 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
SNX1-214ENST00000625244 NINJ2Q9NZG7 142 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 ING1Q9UK53 422 aaPredicted RBP12.17□□□□□ -0.46
SNX1-214ENST00000625244 SLC25A15Q9Y619 301 aa12.17□□□□□ -0.46
SNX1-214ENST00000625244 A0A087WUV0 522 aaPredicted RBP12.16□□□□□ -0.46
SNX1-214ENST00000625244 FAM159BA6NKW6 160 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 PHGDHO43175 533 aaKnown RBP12.16□□□□□ -0.46
SNX1-214ENST00000625244 PRKD3O94806 890 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 SEMA3DO95025 777 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 ANGPTL1O95841 491 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 GIFP27352 417 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 MAPK12P53778 367 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 PHC1P78364 1004 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 PSG6Q00889 435 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 C17orf67Q0P5P2 114 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 CCNIQ14094 377 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 TRIP10Q15642 601 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 SH2D4BQ5SQS7 431 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 CPTPQ5TA50 214 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 LIPJQ5W064 366 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms