RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 IFNEQ86WN2 208 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 PRR22Q8IZ63 422 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 ZNF619Q8N2I2 560 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 PSD4Q8NDX1 1056 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 FAM13CQ8NE31 585 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 TNIP2Q8NFZ5 429 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 OR52E4Q8NGH9 312 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 XAGE5Q8WWM1 108 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 OIT3Q8WWZ8 545 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 DIO2Q92813 273 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 HGDQ93099 445 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 TAMM41Q96BW9 452 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 EFHD2Q96C19 240 aaPredicted RBP6.48□□□□□ -1.37
PSMB3-212ENST00000620309 TMCO6Q96DC7 493 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 SPACA9Q96E40 222 aaPredicted RBP6.48□□□□□ -1.37
PSMB3-212ENST00000620309 SCMH1Q96GD3 660 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 SDF2Q99470 211 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 RSPO3Q9BXY4 272 aaPredicted RBP6.48□□□□□ -1.37
PSMB3-212ENST00000620309 QRSL1Q9H0R6 528 aaKnown RBP6.48□□□□□ -1.37
PSMB3-212ENST00000620309 PCDHAC1Q9H158 963 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 PIF1Q9H611 641 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 LIN28AQ9H9Z2 209 aaKnown RBP6.48□□□□□ -1.37
PSMB3-212ENST00000620309 ZBTB20Q9HC78 741 aaPredicted RBP6.48□□□□□ -1.37
PSMB3-212ENST00000620309 FBXO34Q9NWN3 711 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 CNIH4Q9P003 139 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 ACTR3BQ9P1U1 418 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 EGFL7Q9UHF1 273 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 KCNE5Q9UJ90 142 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 BOKQ9UMX3 212 aaPredicted RBP6.48□□□□□ -1.37
PSMB3-212ENST00000620309 POMPQ9Y244 141 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 WDR45Q9Y484 360 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 PCDHGB3Q9Y5G1 929 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 GPC6Q9Y625 555 aaPredicted RBP6.48□□□□□ -1.37
PSMB3-212ENST00000620309 MED13LQ71F56 2210 aa6.48□□□□□ -1.37
PSMB3-212ENST00000620309 ESPL1Q14674 2120 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 NPIPA5A0A0B4J1W7 369 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 TMEM247A6NEH6 219 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 AGAP5A6NIR3 686 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 C5orf58C9J3I9 102 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 ANKRD65E5RJM6 399 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 NPIPA7E9PJI5 369 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 FCMRO60667 390 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 ICOSLGO75144 302 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 UGT2B11O75310 529 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 STX11O75558 287 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 UGT2B17O75795 530 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 PDE9AO76083 593 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 OR6B1O95007 311 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 EPPINO95925 133 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 OPN1SWP03999 348 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 SEMG1P04279 462 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 C8BP07358 591 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 THBS1P07996 1170 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 NGFRP08138 427 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 NPIPA8P0DM63 369 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 NR2F1P10589 423 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 CYP4B1P13584 511 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 ETS2P15036 469 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 NCK1P16333 377 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 NAGAP17050 411 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 CD247P20963 164 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 LCN1P31025 176 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 MSX2P35548 267 aaPredicted RBP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 DCTP40126 519 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 MEOX1P50221 254 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 PER3P56645 1201 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 CHRNEQ04844 493 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 TRAP1Q12931 704 aaKnown RBP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 EFR3AQ14156 821 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 FLOT2Q14254 428 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 GNA13Q14344 377 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 ZNF141Q15928 474 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 MAPK14Q16539 360 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 DECR1Q16698 335 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 ZNF791Q3KP31 576 aaPredicted RBP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 FLYWCH1Q4VC44 716 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 GPAT3Q53EU6 434 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 LRRC23Q53EV4 343 aaPredicted RBP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 MTX3Q5HYI7 312 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 INTS11Q5TA45 600 aaKnown RBP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 RNF220Q5VTB9 566 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 FNDC7Q5VTL7 733 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 SLC22A10Q63ZE4 541 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 SPINK14Q6IE38 97 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 TMEM81Q6P7N7 255 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 ZNF771Q7L3S4 317 aaPredicted RBP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 PATL1Q86TB9 770 aaKnown RBP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 COMTD1Q86VU5 262 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 CISD2Q8N5K1 135 aaKnown RBP6.47□□□□□ -1.37
PSMB3-212ENST00000620309 FAM86B1Q8N7N1 296 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 ST6GALNAC3Q8NDV1 305 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 MDS2Q8NDY4 140 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 CATSPER1Q8NEC5 780 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 FAM71CQ8NEG0 241 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 GRHL3Q8TE85 626 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 WDR60Q8WVS4 1066 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 FAR1Q8WVX9 515 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 FIG4Q92562 907 aa6.47□□□□□ -1.37
PSMB3-212ENST00000620309 SNRNP40Q96DI7 357 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms