RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 ECHDC3Q96DC8 303 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 DERL3Q96Q80 235 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 JAM3Q9BX67 310 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SHARPINQ9H0F6 387 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SPHK1Q9NYA1 384 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MIOXQ9UGB7 285 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 KIF25Q9UIL4 384 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 COL2A1P02458 1487 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 GXYLT2A0PJZ3 443 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 FAM171A2A8MVW0 826 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OIP5O43482 229 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ACP5P13686 325 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 FUT1P19526 365 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 EDNRAP25101 427 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TRIM23P36406 574 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SMAD3P84022 425 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 UPP1Q16831 310 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PRRT3Q5FWE3 981 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ADGRF1Q5T601 910 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PRAMEF17Q5VTA0 474 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 BTN2A1Q7KYR7 527 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OAFQ86UD1 273 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 KCTD12Q96CX2 325 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CHFRQ96EP1 664 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TRPV4Q9HBA0 871 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 IKZF2Q9UKS7 526 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 C5orf51A6NDU8 294 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 EEF1E1-BLOC1S5C9J1V9 151 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PRAMEF4O60810 478 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 KRT33AO76009 404 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SOX30O94993 753 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PIPP12273 146 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 GTF2F2P13984 249 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OR12D2P58182 307 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OR2B8PP59922 312 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 E2F1Q01094 437 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TPBGQ13641 420 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SERTAD2Q14140 314 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CCL15Q16663 113 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PRAMEF9Q5VWM5 478 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 NSMAFQ92636 917 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CXorf36Q9H7Y0 433 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 BABAM2Q9NXR7 383 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PTTG3PQ9NZH4 202 aa13.13□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SMIM35A0A1B0GVV1 85 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MT-ND5P03915 603 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 C8GP07360 202 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 FAUP35544 74 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PPT1P50897 306 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SIM1P81133 766 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 AFMIDQ63HM1 303 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SVBPQ8N300 66 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 GHSRQ92847 366 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 EID2BQ96D98 161 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SLC35G5Q96KT7 338 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 C10orf90Q96M02 699 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 C20orf24Q9BUV8 137 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MRPS30Q9NP92 439 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MCM3APO60318 1980 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 LY75O60449 1722 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OR2W5A6NFC9 320 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MFSD2BA6NFX1 497 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CTSCP53634 463 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RAP2BP61225 183 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MYLIPQ8WY64 445 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 F2RL3Q96RI0 385 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MACROD1Q9BQ69 325 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 POLDIP3Q9BY77 421 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SLC25A19Q9HC21 320 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CYSLTR2Q9NS75 346 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 BRWD1Q9NSI6 2320 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 FAM86C2PA6NEL3 165 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MCRIP1C9JLW8 97 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PRKCZQ05513 592 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 AVPI1Q5T686 147 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CORO6Q6QEF8 472 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 C16orf78Q8WTQ4 265 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SFT2D1Q8WV19 159 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SMPDL3BQ92485 455 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ZC3HAV1LQ96H79 300 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PDCD1LG2Q9BQ51 273 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RSRP1Q9BUV0 290 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 GPATCH2Q9NW75 528 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 BPTFQ12830 3046 aa13.12□□□□□ -0.31
TNFRSF11A-205ENST00000616710 KCNAB3O43448 404 aa13.11□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RAD1O60671 282 aa13.11□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PQBP1O60828 265 aaKnown RBP13.11□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SCN2BO60939 215 aa13.11□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ZNF254O75437 659 aa13.11□□□□□ -0.31
TNFRSF11A-205ENST00000616710 IGSF6O95976 241 aa13.11□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TFPIP10646 304 aa13.11□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CKBP12277 381 aa13.11□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ART1P52961 327 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms