RNA–Protein interactions for RNA: ENST00000598258.5

TMEM143-208, Transcript of transmembrane protein 143, human

TSL 4

Gene TMEM143, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM143-208	ENST00000598258	RNF130	Q86XS8	419 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	C10orf111	Q8N326	155 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	AURKB	Q96GD4	344 aa	Predicted RBP	13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	SFXN2	Q96NB2	322 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	ZNF350	Q9GZX5	532 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	QRSL1	Q9H0R6	528 aa	Known RBP	13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	ZNF385D	Q9H6B1	395 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	UBQLN4	Q9NRR5	601 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	ZIM2	Q9NZV7	527 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	MRTO4	Q9UKD2	239 aa	Known RBP	13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	MKLN1	Q9UL63	735 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	VDAC3	Q9Y277	283 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	PCDHGB3	Q9Y5G1	929 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	ABCA12	Q86UK0	2595 aa		13.81	□□□□□ -0.2
TMEM143-208	ENST00000598258	CSMD1	Q96PZ7	3565 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	UQCRHL	A0A096LP55	91 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258		A0A1W2PQD3	144 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	NDUFB5	O43674	189 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	EFNA2	O43921	213 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	ADAM11	O75078	769 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	ACTL6A	O96019	429 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	CEACAM8	P31997	349 aa	Predicted RBP	13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	MRPL19	P49406	292 aa	Known RBP	13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	AGFG1	P52594	562 aa	Known RBP	13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	ZNF136	P52737	540 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	C17orf67	Q0P5P2	114 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	FOXF2	Q12947	444 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	GSTA3	Q16772	222 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	ARHGAP11B	Q3KRB8	267 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	NSUN5P2	Q63ZY6	315 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	TMEM211	Q6ICI0	200 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	TYW3	Q6IPR3	259 aa	Known RBP	13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	SLC2A7	Q6PXP3	512 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	FRRS1	Q6ZNA5	592 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	MSRB3	Q8IXL7	192 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	GOLGA6L1	Q8N7Z2	621 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	ANKFN1	Q8N957	763 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	LILRB4	Q8NHJ6	448 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	ZFP90	Q8TF47	636 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	DYDC1	Q8WWB3	177 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	PANX1	Q96RD7	426 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	TRIB1	Q96RU8	372 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	RUBCNL	Q9H714	662 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	SLAMF8	Q9P0V8	285 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	CLCF1	Q9UBD9	225 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	ICAM5	Q9UMF0	924 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	LRBA	P50851	2863 aa		13.8	□□□□□ -0.2
TMEM143-208	ENST00000598258	MPDZ	O75970	2070 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	TEX15	Q9BXT5	2789 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	CLDN24	A6NM45	220 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	AHRR	A9YTQ3	701 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	UGT2B17	O75795	530 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	TGDS	O95455	350 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	TGM6	O95932	706 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	OPN1LW	P04000	364 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	CHRM4	P08173	479 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	GABRA1	P14867	456 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	CAPN3	P20807	821 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	CHM	P24386	653 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	SHC1	P29353	583 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	CHRNB4	P30926	498 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	POLR2J	P52435	117 aa	Known RBP	13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	ATP12A	P54707	1039 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	GPR68	Q15743	365 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	SYPL1	Q16563	259 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	PLPPR5	Q32ZL2	321 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	FLYWCH1	Q4VC44	716 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	PDZK1	Q5T2W1	519 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	RAET1L	Q5VY80	246 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	ZNF621	Q6ZSS3	439 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	GGN	Q86UU5	652 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	OR10Q1	Q8NGQ4	319 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	XAGE5	Q8WWM1	108 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	GTF2H4	Q92759	462 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	CCDC28B	Q9BUN5	200 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	PAIP1	Q9H074	479 aa	Known RBP	13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	MED17	Q9NVC6	651 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	SLC25A37	Q9NYZ2	338 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	PCDHGB4	Q9UN71	923 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	CARD8	Q9Y2G2	431 aa		13.79	□□□□□ -0.2
TMEM143-208	ENST00000598258	PDZD2	O15018	2839 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	MBD3L3	A6NE82	208 aa	Predicted RBP	13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	CLCA1	A8K7I4	914 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	POLR3G	O15318	223 aa	Predicted RBP	13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	HCRTR2	O43614	444 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	KIAA0513	O60268	411 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	IL6	P05231	212 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	LINGO3	P0C6S8	592 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	IGFBP2	P18065	325 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	LCN1	P31025	176 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	DLX5	P56178	289 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	CHRNE	Q04844	493 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	SNTB1	Q13884	538 aa	Known RBP	13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	ZNF141	Q15928	474 aa		13.78	□□□□□ -0.2
TMEM143-208	ENST00000598258	CTU2	Q2VPK5	515 aa	Known RBP	13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms