RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 FLYWCH1Q4VC44 716 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 PDZK1Q5T2W1 519 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 MTFR2Q6P444 385 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 B3GNT6Q6ZMB0 384 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 FRRS1Q6ZNA5 592 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 MSANTD1Q6ZTZ1 278 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 IFNEQ86WN2 208 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 LIX1LQ8IVB5 337 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 C10orf111Q8N326 155 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 POC1BQ8TC44 478 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ROPN1LQ96C74 230 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 SDCCAG3Q96C92 435 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 UCK2Q9BZX2 261 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ZNF350Q9GZX5 532 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 SAP130Q9H0E3 1048 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 MED4Q9NPJ6 270 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 CCDC167Q9P0B6 97 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 Q9UFV3 132 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 DKKL1Q9UK85 242 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 CAMK2AQ9UQM7 478 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 ZNF337Q9Y3M9 751 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 PCDHB14Q9Y5E9 798 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 PCDHGB3Q9Y5G1 929 aa10.09□□□□□ -0.79
VRK3-210ENST00000596121 PHF3Q92576 2039 aaKnown RBP10.09□□□□□ -0.79
VRK3-210ENST00000596121 OR2M5A3KFT3 312 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 DUXAA6NLW8 204 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 FIGNL2A6NMB9 653 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 AHRRA9YTQ3 701 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 NR5A2O00482 541 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 SCDO00767 359 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 EFNA2O43921 213 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 WDR1O75083 606 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 UGT2B17O75795 530 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 SOX30O94993 753 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 EPPINO95925 133 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 CHRM4P08173 479 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 NUDT7P0C024 238 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ETFAP13804 333 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ZNF708P17019 499 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 NCF2P19878 526 aaPredicted RBP10.08□□□□□ -0.8
VRK3-210ENST00000596121 IL11P20809 199 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 AGAP20933 346 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ATP6V1C1P21283 382 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 CHMP24386 653 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 PSMA4P25789 261 aaKnown RBP10.08□□□□□ -0.8
VRK3-210ENST00000596121 MDH1P40925 334 aaKnown RBP10.08□□□□□ -0.8
VRK3-210ENST00000596121 KHKP50053 298 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 SMSP52788 366 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 SUCLG1P53597 346 aaKnown RBP10.08□□□□□ -0.8
VRK3-210ENST00000596121 CHRNEQ04844 493 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 SRYQ05066 204 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 LRRC74AQ0VAA2 488 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ART3Q13508 389 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 GPR68Q15743 365 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 TOMM34Q15785 309 aaPredicted RBP10.08□□□□□ -0.8
VRK3-210ENST00000596121 AGKQ53H12 422 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 TMEM211Q6ICI0 200 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 POMZP3Q6PJE2 187 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 XKRXQ6PP77 449 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ADGRE4PQ86SQ3 457 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ARFGAP2Q8N6H7 521 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 NAXEQ8NCW5 288 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 TNIP2Q8NFZ5 429 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 PHOSPHO1Q8TCT1 267 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 RND1Q92730 232 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 SPDL1Q96EA4 605 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ITCHQ96J02 903 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 SFXN2Q96NB2 322 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ZNF317Q96PQ6 595 aaPredicted RBP10.08□□□□□ -0.8
VRK3-210ENST00000596121 TUBA1CQ9BQE3 449 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 TMEM120AQ9BXJ8 343 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 NMUR2Q9GZQ4 415 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 HOXD1Q9GZZ0 328 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 QRSL1Q9H0R6 528 aaKnown RBP10.08□□□□□ -0.8
VRK3-210ENST00000596121 CCDC134Q9H6E4 229 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 RUBCNLQ9H714 662 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 TPT1P8Q9HAU6 139 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 ICAM5Q9UMF0 924 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 VDAC3Q9Y277 283 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 CARD8Q9Y2G2 431 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 DTNAQ9Y4J8 743 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 MAST4O15021 2626 aa10.08□□□□□ -0.8
VRK3-210ENST00000596121 CACNA1CQ13936 2221 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 ADGRG4Q8IZF6 3080 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 A0A096LPI6 279 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 TRBV5-3A0A0A0MS03 114 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 NKX2-6A6NCS4 301 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 SERINC4A6NH21 518 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 CLDN24A6NM45 220 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 PRSS44E7EML9 344 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 HCRTR2O43614 444 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 KIAA0513O60268 411 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 STX11O75558 287 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 H6PDO95479 791 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 CLDN14O95500 239 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 GUSBP08236 651 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 TFPTP0C1Z6 253 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 LINGO3P0C6S8 592 aa10.07□□□□□ -0.8
VRK3-210ENST00000596121 GABRA1P14867 456 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms