RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 SNTA1Q13424 505 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 NRF1Q16656 503 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 GLIPR1L2Q4G1C9 344 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 MRPL2Q5T653 305 aaKnown RBP13.9□□□□□ -0.18
DDX39A-211ENST00000590239 APOOLQ6UXV4 268 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 MISPQ8IVT2 679 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 CLIP4Q8N3C7 705 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 ZNF614Q8N883 585 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 GRHL3Q8TE85 626 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 PAQR8Q8TEZ7 354 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 ZCCHC14Q8WYQ9 949 aaKnown RBP13.9□□□□□ -0.18
DDX39A-211ENST00000590239 SLCO4A1Q96BD0 722 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 SEPHS2Q99611 448 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 ARHGDIGQ99819 225 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 UTP23Q9BRU9 249 aaKnown RBP13.9□□□□□ -0.18
DDX39A-211ENST00000590239 ZNF552Q9H707 407 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-211ENST00000590239 YY1AP1Q9H869 796 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 S100A14Q9HCY8 104 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 SH2D2AQ9NP31 389 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 IL1RAPQ9NPH3 570 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 AURKCQ9UQB9 309 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 SH3GLB1Q9Y371 365 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 AP4S1Q9Y587 144 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 CHCHD2Q9Y6H1 151 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-211ENST00000590239 EXPH5Q8NEV8 1989 aa13.9□□□□□ -0.18
DDX39A-211ENST00000590239 URB1O60287 2271 aaKnown RBP13.89□□□□□ -0.19
DDX39A-211ENST00000590239 MED13Q9UHV7 2174 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 ANKRD33BA6NCL7 494 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 CLDN24A6NM45 220 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 TAF4O00268 1085 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 NDUFB5O43674 189 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 CSTAP01040 98 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 UBL4AP11441 157 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 CD96P40200 585 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 MAGEA2P43356 314 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 TUBA3CQ13748 450 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 TBCELQ5QJ74 424 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 ZNF468Q5VIY5 522 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-211ENST00000590239 SLC22A10Q63ZE4 541 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 TUBA3EQ6PEY2 450 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 LINC00696Q6ZRV3 163 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 PIWIL3Q7Z3Z3 882 aaKnown RBP13.89□□□□□ -0.19
DDX39A-211ENST00000590239 COMTD1Q86VU5 262 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 ZNF440Q8IYI8 595 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 CYP4Z2PQ8N1L4 340 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 FAM71CQ8NEG0 241 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 FDCSPQ8NFU4 85 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 SNRNP27Q8WVK2 155 aaKnown RBP13.89□□□□□ -0.19
DDX39A-211ENST00000590239 PYDC1Q8WXC3 89 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 CNOT9Q92600 299 aaKnown RBP13.89□□□□□ -0.19
DDX39A-211ENST00000590239 C7orf34Q96L11 122 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 CHID1Q9BWS9 393 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 METTL7AQ9H8H3 244 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 CPNE5Q9HCH3 593 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 EXOSC3Q9NQT5 275 aaKnown RBP13.89□□□□□ -0.19
DDX39A-211ENST00000590239 ASH1LQ9NR48 2969 aaKnown RBP13.89□□□□□ -0.19
DDX39A-211ENST00000590239 RLIMQ9NVW2 624 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 CNOT11Q9UKZ1 510 aaKnown RBP13.89□□□□□ -0.19
DDX39A-211ENST00000590239 IGF2RP11717 2491 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 FRYQ5TBA9 3013 aa13.89□□□□□ -0.19
DDX39A-211ENST00000590239 H3BNX3 289 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 GTPBP1O00178 669 aaKnown RBP13.88□□□□□ -0.19
DDX39A-211ENST00000590239 ADAM10O14672 748 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 MGRN1O60291 552 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 EIF4E2O60573 245 aaKnown RBP13.88□□□□□ -0.19
DDX39A-211ENST00000590239 ANGPTL1O95841 491 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 IFNW1P05000 195 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 ITGA2P17301 1181 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 ITPKBP27987 946 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 CASP3P42574 277 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 GAS1P54826 345 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 OC90Q02509 493 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-211ENST00000590239 RIPK1Q13546 671 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 RAPSNQ13702 412 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 CD226Q15762 336 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 SLC30A6Q6NXT4 461 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 IGFL2Q6UWQ7 119 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 MARCH3Q86UD3 253 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 CARM1Q86X55 608 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 ZDHHC21Q8IVQ6 265 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 PHOSPHO1Q8TCT1 267 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 NTNG2Q96CW9 530 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 ANGPTL4Q9BY76 406 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 TIMMDC1Q9NPL8 285 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 SDHAF3Q9NRP4 125 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 DNAJB12Q9NXW2 375 aaKnown RBP13.88□□□□□ -0.19
DDX39A-211ENST00000590239 LRFN1Q9P244 771 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 PRDM4Q9UKN5 801 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 CPAMD8Q8IZJ3 1885 aa13.88□□□□□ -0.19
DDX39A-211ENST00000590239 OR5H15A6NDH6 313 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 ZNF264O43296 627 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 HNRNPRO43390 633 aaKnown RBP13.87□□□□□ -0.19
DDX39A-211ENST00000590239 SCO2O43819 266 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 KRT36O76013 467 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 WDPCPO95876 746 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 FABP3P05413 133 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 FCGR1AP12314 374 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 TNFRSF1BP20333 461 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 PTGDSP41222 190 aa13.87□□□□□ -0.19
DDX39A-211ENST00000590239 OR1E2P47887 323 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms