RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	CHDH	Q8NE62	594 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CDS1	Q92903	461 aa		11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TLCD1	Q96CP7	247 aa		11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CHMP6	Q96FZ7	201 aa		11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	PAIP2	Q9BPZ3	127 aa	Known RBP	11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	YIPF4	Q9BSR8	244 aa		11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	NMUR2	Q9GZQ4	415 aa		11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	POLE3	Q9NRF9	147 aa		11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	PACSIN3	Q9UKS6	424 aa		11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	NUP214	P35658	2090 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	FAM221A	A4D161	298 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	NPIPB9	F8W1W9	429 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	MSTN	O14793	375 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	KLF11	O14901	512 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ANKRD28	O15084	1053 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	EEF1E1	O43324	174 aa	Known RBP	11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	UQCRC2	P22695	453 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ELK4	P28324	431 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	MAGEA8	P43361	318 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	MAGOH	P61326	146 aa	Known RBP	11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	RAC1	P63000	192 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	OR4F3	Q6IEY1	312 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ESPNL	Q6ZVH7	1005 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	P4HA3	Q7Z4N8	544 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	C6orf120	Q7Z4R8	191 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ZAR1	Q86SH2	424 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CDH24	Q86UP0	819 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ANKRD42	Q8N9B4	389 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TOR1AIP2	Q8NFQ8	470 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	B4GALNT2	Q8NHY0	566 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	FBXO30	Q8TB52	745 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	INTS12	Q96CB8	462 aa	Known RBP	11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	OR7D2	Q96RA2	312 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	NUF2	Q9BZD4	464 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	RNF122	Q9H9V4	155 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TMBIM4	Q9HC24	238 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	EXD2	Q9NVH0	621 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	DTNA	Q9Y4J8	743 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	MED12L	Q86YW9	2145 aa		11.35	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	RNF103-CHMP3	A0A140T963	221 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708		A0A1W2PNV4	684 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TUBAL3	A6NHL2	446 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	C17orf51	A8MQB3	221 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708		A8MXE2	369 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708		E9PBE3	544 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708		H3BML4	177 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ADAMDEC1	O15204	470 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	EIF4E2	O60573	245 aa	Known RBP	11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	SCN2B	O60939	215 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	STX11	O75558	287 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CTAG2	O75638	210 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TNFSF13	O75888	250 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TGM6	O95932	706 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	EPX	P11678	715 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	MATN1	P21941	496 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ME2	P23368	584 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	SOAT1	P35610	550 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	P2RX1	P51575	399 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CLDN15	P56746	228 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	FOXF2	Q12947	444 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CASP8	Q14790	479 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	PLPPR5	Q32ZL2	321 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	PDSS1	Q5T2R2	415 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CCNJ	Q5T5M9	372 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ATAD3B	Q5T9A4	648 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TRIML2	Q8N7C3	387 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	OR4A15	Q8NGL6	344 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	ARL8A	Q96BM9	186 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CCDC115	Q96NT0	180 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	SDF2	Q99470	211 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	RBM24	Q9BX46	236 aa	Known RBP	11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	MANSC1	Q9H8J5	431 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	GLRX2	Q9NS18	164 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	MED17	Q9NVC6	651 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	PNPO	Q9NVS9	261 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	AIG1	Q9NVV5	245 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	FBXO34	Q9NWN3	711 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CRIM1	Q9NZV1	1036 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	BTNL2	Q9UIR0	455 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	KIAA1549	Q9HCM3	1950 aa		11.34	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	PCNX3	Q9H6A9	2034 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GJE1	A6NN92	205 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708		A6NNC1	897 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GTPBP1	O00178	669 aa	Known RBP	11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SDHD	O14521	159 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	LINGO3	P0C6S8	592 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CD8B	P10966	210 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	IDO1	P14902	403 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PSMA4	P25789	261 aa	Known RBP	11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	S100A3	P33764	101 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CPA2	P48052	419 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ANXA11	P50995	505 aa	Known RBP	11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SUCLG1	P53597	346 aa	Known RBP	11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	KRTAP10-9	P60411	292 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZNF141	Q15928	474 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SGCB	Q16585	318 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ARHGAP11B	Q3KRB8	267 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms