RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 HECTD1Q9ULT8 2610 aa10.33□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SPTA1P02549 2419 aa10.33□□□□□ -0.76
CDK5RAP3-210ENST00000578733 NCKAP5O14513 1909 aa10.33□□□□□ -0.76
CDK5RAP3-210ENST00000578733 DSPPQ9NZW4 1301 aa10.33□□□□□ -0.76
CDK5RAP3-210ENST00000578733 NPIPA5A0A0B4J1W7 369 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SERINC4A6NH21 518 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 AGAP5A6NIR3 686 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 NPIPA7E9PJI5 369 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 GSC2O15499 205 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RRP9O43818 475 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PEX1O43933 1283 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 FADS1O60427 444 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 UGT2B17O75795 530 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ANGPTL1O95841 491 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PABPC4LP0CB38 370 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 NPIPA8P0DM63 369 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 UBL4AP11441 157 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 MSX1P28360 303 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 AQP1P29972 269 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PRKAR1BP31321 381 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ADH7P40394 386 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 MEOX1P50221 254 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PCBP3P57721 371 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PLGLB1Q02325 96 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 FGFBP1Q14512 234 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 FXNQ16595 210 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ZSCAN26Q16670 478 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 LRRC23Q53EV4 343 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 KLHL26Q53HC5 615 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 MTX3Q5HYI7 312 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PDZK1Q5T2W1 519 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RNF220Q5VTB9 566 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 GLYATQ6IB77 296 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RPUSD3Q6P087 351 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ASRGL1Q7L266 308 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 GALNTL5Q7Z4T8 443 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ZNF440Q8IYI8 595 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RNF148Q8N7C7 305 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 CATSPER1Q8NEC5 780 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 OR4K17Q8NGC6 315 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 OR4C3Q8NH37 302 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 GRHL3Q8TE85 626 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 LRGUKQ96M69 825 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RAB3IPQ96QF0 476 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PINK1Q9BXM7 581 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RUBCNLQ9H714 662 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 CD300AQ9UGN4 299 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RPS6KA6Q9UK32 745 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 BAG5Q9UL15 447 aa10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ZNF443Q9Y2A4 671 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-210ENST00000578733 NPIPB9F8W1W9 429 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ZNF264O43296 627 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 EIF4E2O60573 245 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 CIB2O75838 187 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RASAL1O95294 804 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 CSTAP01040 98 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 CRYABP02511 175 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PDGFAP04085 211 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 NID1P14543 1247 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 GGT1P19440 569 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RPS4Y1P22090 263 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 KDELR2P33947 212 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 GCKP35557 465 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SLC6A8P48029 635 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ST13P50502 369 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SUMO3P55854 103 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 NCALDP61601 193 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 KCNJ10P78508 379 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 TRAP1Q12931 704 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 TRIM25Q14258 630 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 MAPK11Q15759 364 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ZNF550Q7Z398 422 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ZAR1Q86SH2 424 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 MARCH3Q86UD3 253 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SLC22A16Q86VW1 577 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ZNF227Q86WZ6 799 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PTRH1Q86Y79 214 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PLCZ1Q86YW0 608 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SULF2Q8IWU5 870 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 EID3Q8N140 333 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 TMCO5AQ8N6Q1 288 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 RBMXL3Q8N7X1 1067 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 TOR1AIP2Q8NFQ8 470 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 OR2M7Q8NG81 312 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 OR1J4Q8NGS1 313 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SLC35B4Q969S0 331 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 ASB9Q96DX5 294 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 NSMCE2Q96MF7 247 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 JSRP1Q96MG2 331 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 GORASP2Q9H8Y8 452 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 EGFL7Q9UHF1 273 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 PRDM4Q9UKN5 801 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SAMD4AQ9UPU9 718 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SNX13Q9Y5W8 968 aa10.31□□□□□ -0.76
CDK5RAP3-210ENST00000578733 M0QX08 132 aa10.3□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SYT5O00445 386 aa10.3□□□□□ -0.76
CDK5RAP3-210ENST00000578733 GNB5O14775 395 aa10.3□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SNPHO15079 494 aa10.3□□□□□ -0.76
CDK5RAP3-210ENST00000578733 SUV39H1O43463 412 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms