RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 VASNQ6EMK4 673 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 MRM1Q6IN84 353 aaKnown RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 SAMD14Q8IZD0 417 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 ING5Q8WYH8 240 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 HS6ST2Q96MM7 605 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 ZSWIM3Q96MP5 696 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 C7orf50Q9BRJ6 194 aaKnown RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 IFT27Q9BW83 186 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 CACNG6Q9BXT2 260 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 MRPS7Q9Y2R9 242 aaKnown RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 KLF4O43474 513 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 FZD7O75084 574 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 SERPINA3P01011 423 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 IFNA7P01567 189 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 TCRBP04435 133 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 PDX1P52945 283 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 PER3P56645 1201 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 RAB14P61106 215 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 NTHL1P78549 312 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 HSF2Q03933 536 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 COL28A1Q2UY09 1125 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 PRPF38BQ5VTL8 546 aaKnown RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 PLPP4Q5VZY2 271 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 BAIAP2L2Q6UXY1 529 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 SLC44A3Q8N4M1 653 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 MS4A15Q8N5U1 240 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF655Q8N720 491 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 OR2A1Q8NGT9 310 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 OR2L8Q8NGY9 312 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 LRRC20Q8TCA0 184 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 NXPE3Q969Y0 559 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 COL26A1Q96A83 441 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 MS4A4EQ96PG1 132 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 INSM2Q96T92 566 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 DPH1Q9BZG8 443 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 SPRTNQ9H040 489 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-207ENST00000572253 OR51V1Q9H2C8 321 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 PRDM7Q9NQW5 492 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 UCKL1Q9NWZ5 548 aa10.03□□□□□ -0.8
CCDC40-207ENST00000572253 TBC1D3KA0A087X1G2 549 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 TBC1D3BA6NDS4 549 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 TBC1D3FA6NER0 549 aaPredicted RBP10.02□□□□□ -0.8
CCDC40-207ENST00000572253 SLC9B1P1A6NJY1 282 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 LRRN3E7EW58 273 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 J3QLW9 94 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 SSNA1O43805 119 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 LANCL1O43813 399 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF19P17023 458 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 RAB3BP20337 219 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 CMPK1P30085 196 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 TSFMP43897 325 aaKnown RBP10.02□□□□□ -0.8
CCDC40-207ENST00000572253 TCEAL5Q5H9L2 206 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 TBC1D3GQ6DHY5 549 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.02□□□□□ -0.8
CCDC40-207ENST00000572253 ABHD4Q8TB40 342 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 SCMH1Q96GD3 660 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 HHIPL1Q96JK4 782 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 GPR137Q96N19 417 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 MENTQ9BUN1 341 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 LRRN3Q9H3W5 708 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 TMEM5Q9Y2B1 443 aa10.02□□□□□ -0.8
CCDC40-207ENST00000572253 TEX51A0A1B0GUA7 166 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 A0A1B0GVC2 190 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 A6NIN4 97 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 LEUTXA8MZ59 168 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 GPR89AB7ZAQ6 455 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 REM1O75628 298 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 SOX30O94993 753 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 GPR89BP0CG08 455 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 DUSP2Q05923 314 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 WDR45BQ5MNZ6 344 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 SLC39A5Q6ZMH5 540 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 RNF113BQ8IZP6 322 aaKnown RBP10.02□□□□□ -0.81
CCDC40-207ENST00000572253 ADAMTS14Q8WXS8 1223 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 SLC35A4Q96G79 324 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 ZFP3Q96NJ6 502 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 ACTR6Q9GZN1 396 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 WDR26Q9H7D7 661 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 MED20Q9H944 212 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 SIDT1Q9NXL6 827 aaKnown RBP10.02□□□□□ -0.81
CCDC40-207ENST00000572253 MAT2BQ9NZL9 334 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 SPEF1Q9Y4P9 236 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 NPFFR2Q9Y5X5 522 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 HRO43593 1189 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 FCMRO60667 390 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 UBL3O95164 117 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 H2AFB2P0C5Z0 115 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 LAMP2P13473 410 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 PTNP21246 168 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 RNASE12Q5GAN4 147 aaKnown RBP10.02□□□□□ -0.81
CCDC40-207ENST00000572253 C6orf132Q5T0Z8 1188 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 LYPD4Q6UWN0 246 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 C12orf40Q86WS4 652 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 SIX5Q8N196 739 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 ARMC5Q96C12 935 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 AHCYL2Q96HN2 611 aaKnown RBP10.02□□□□□ -0.81
CCDC40-207ENST00000572253 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC40-207ENST00000572253 GHITMQ9H3K2 345 aa10.02□□□□□ -0.81
CCDC40-207ENST00000572253 PHPT1Q9NRX4 125 aaPredicted RBP10.02□□□□□ -0.81
CCDC40-207ENST00000572253 GLTPQ9NZD2 209 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms