RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ERVFC1-1P60608 527 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 MRPS6P82932 125 aaKnown RBP3.26□□□□□ -1.89
UBR1-211ENST00000569971 OVGP1Q12889 678 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 NME3Q13232 169 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 STX3Q13277 289 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 ITGA9Q13797 1035 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 PAFAH1B3Q15102 231 aaKnown RBP3.26□□□□□ -1.89
UBR1-211ENST00000569971 CHI3L2Q15782 390 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 INAQ16352 499 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 DUSP5Q16690 384 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 LRRC37A5PQ49AS3 106 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 SPANXN3Q5MJ09 141 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 STEAP4Q687X5 459 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 NCBP2-AS2Q69YL0 99 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 WBP2NLQ6ICG8 309 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 SLC27A4Q6P1M0 643 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 LRRC8BQ6P9F7 803 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 DLEU7Q6UYE1 221 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 TIFABQ6ZNK6 161 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 FAM131BQ86XD5 332 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 KDM8Q8N371 416 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 KIF2BQ8N4N8 673 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 FAM89BQ8N5H3 189 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 RFLNBQ8N5W9 214 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 CCDC185Q8N715 623 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 TMEM99Q8N816 258 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 TCEANCQ8N8B7 351 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 APOBEC4Q8WW27 367 aaKnown RBP3.26□□□□□ -1.89
UBR1-211ENST00000569971 STMN2Q93045 179 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 NTAN1Q96AB6 310 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 BPIFA2Q96DR5 249 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 NSMCE2Q96MF7 247 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 RILPQ96NA2 401 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 TSNARE1Q96NA8 513 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 NECTIN4Q96NY8 510 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 OLFM3Q96PB7 478 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 NPY6RQ99463 290 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 VAT1Q99536 393 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 KLF6Q99612 283 aaPredicted RBP3.26□□□□□ -1.89
UBR1-211ENST00000569971 LPAR4Q99677 370 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 SYT15Q9BQS2 421 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 MTG1Q9BT17 334 aaPredicted RBP3.26□□□□□ -1.89
UBR1-211ENST00000569971 ATP13A3Q9H7F0 1226 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 YY1AP1Q9H869 796 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 LRRC40Q9H9A6 602 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 BATF3Q9NR55 127 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 TAS2R3Q9NYW6 316 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 BFARQ9NZS9 450 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 COX16Q9P0S2 106 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 KLHL8Q9P2G9 620 aaPredicted RBP3.26□□□□□ -1.89
UBR1-211ENST00000569971 DCDC2Q9UHG0 476 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 FBXL4Q9UKA2 621 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 PILRAQ9UKJ1 303 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 ADAM28Q9UKQ2 775 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 CDH9Q9ULB4 789 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 SATB2Q9UPW6 733 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 C15orf41Q9Y2V0 281 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 PLLPQ9Y342 182 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 HES2Q9Y543 173 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 MGAMO43451 1857 aa3.26□□□□□ -1.89
UBR1-211ENST00000569971 MCM3APO60318 1980 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 MSGN1A6NI15 193 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 ARHGAP42A6NI28 874 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 VGLL3A8MV65 326 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SMIM1B2RUZ4 78 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SPECC1L-ADORA2AF8WAN1 911 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CLDN5O00501 218 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SYT7O43581 403 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 MFSD11O43934 449 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 FGF17O60258 216 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SMPD2O60906 423 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SAP30O75446 220 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CLN5O75503 358 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CIB2O75838 187 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 PIAS1O75925 651 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 ANXA9O76027 345 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 KLHL2O95198 593 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 AP2A1O95782 977 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 BPGMP07738 259 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 MYL2P10916 166 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CYP2B6P20813 491 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 CALB2P22676 271 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 ITGA3P26006 1051 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 OR1D2P34982 312 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SPRP35270 261 aaPredicted RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 SLC1A3P43003 542 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 PITPNBP48739 271 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SERPINB8P50452 374 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 TNFSF10P50591 281 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 LINC01547P58512 204 aaPredicted RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 DAOAP59103 153 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 GMFBP60983 142 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 BTG1P62324 171 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 IRX4P78413 519 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 HTD2P86397 168 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 SP3Q02447 781 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 POU3F1Q03052 451 aaPredicted RBP3.25□□□□□ -1.89
UBR1-211ENST00000569971 ZNF33AQ06730 810 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 BST1Q10588 318 aa3.25□□□□□ -1.89
UBR1-211ENST00000569971 ASPHQ12797 758 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms