RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 THBS1P07996 1170 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 LSSP48449 732 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 OR10A3P58181 314 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SH3BP2P78314 561 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 GPLD1P80108 840 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 TPBGQ13641 420 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 NXNL2Q5VZ03 156 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SFXN4Q6P4A7 337 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MEPCEQ7L2J0 689 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SLAIN1Q8ND83 568 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 OR4E2Q8NGC2 313 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 METTL21AQ8WXB1 218 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 NKD1Q969G9 470 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 UPRTQ96BW1 309 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CMBLQ96DG6 245 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 RNF170Q96K19 258 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 UHRF2Q96PU4 802 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 LYSMD1Q96S90 227 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ZCCHC4Q9H5U6 513 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 UBE2J1Q9Y385 318 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 BCL2L11O43521 198 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ABHD16AO95870 558 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 EVX1P49640 407 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CYP27C1Q4G0S4 372 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 BAP18Q8IXM2 172 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF679Q8IYX0 411 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF485Q8NCK3 441 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 UBTD2Q8WUN7 234 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 TMEM234Q8WY98 164 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 OVCA2Q8WZ82 227 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF582Q96NG8 517 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 HRH4Q9H3N8 390 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 PATZ1Q9HBE1 687 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 PHRF1Q9P1Y6 1649 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MEIKINA0A087WXM9 373 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 DDTLA6NHG4 134 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 FAM166BA8MTA8 275 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 BPNT1O95861 308 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 HLA-AP01891 365 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 HCKP08631 526 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SOX18P35713 384 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 PKIAP61925 76 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CREB5Q02930 508 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 GPR176Q14439 515 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 C4orf17Q53FE4 359 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 GPR139Q6DWJ6 353 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 TPRG1Q6ZUI0 275 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 GPR142Q7Z601 462 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 NRMQ8IXM6 262 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CBARPQ8N350 705 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MFSD4AQ8N468 514 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 NANOGP1Q8N7R0 232 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 LRRN4Q8WUT4 740 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 HOXB13Q92826 284 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ORAI3Q9BRQ5 295 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CBLCQ9ULV8 474 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 PQLC2LA1A4F0 135 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 FAM221BA6H8Z2 402 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 ANKRD66B4E2M5 251 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 UMAD1C9J7I0 102 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 AP4M1O00189 453 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 MEN1O00255 615 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 OR2C1O95371 312 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 ARHGAP40Q5TG30 622 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 OVCH2Q7RTZ1 564 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 MDGA2Q7Z553 956 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 TECTBQ96PL2 329 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 CLTCQ00610 1675 aaKnown RBP6.71□□□□□ -1.33
CNOT1-216ENST00000569240 PCDH8O95206 1070 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 HRGP04196 525 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 GABRB1P18505 474 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 RFC3P40938 356 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 MADCAM1Q13477 382 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 FAM26EQ8N5C1 309 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 OR8S1Q8NH09 359 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 MCOLN1Q9GZU1 580 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 DEFB129Q9H1M3 183 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 HIPK2Q9H2X6 1198 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 KLHL13Q9P2N7 655 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 FBXL3Q9UKT7 428 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF281Q9Y2X9 895 aa6.71□□□□□ -1.33
CNOT1-216ENST00000569240 K7ERU9 68 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 OR1F1O43749 312 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 SH3BGRLO75368 114 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 APBA3O96018 575 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 ITGA5P08648 1049 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 OR2T7P0C7T2 308 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 VEGFAP15692 232 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 SDHBP21912 280 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 HBG1P69891 147 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 HBG2P69892 147 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 RAB30Q15771 203 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 PGGHGQ32M88 737 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 FAM209AQ5JX71 171 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 SEZ6L2Q6UXD5 910 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 NKAIN3Q8N8D7 197 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF610Q8N9Z0 462 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 OR2T27Q8NH04 317 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 SYNPRQ8TBG9 265 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 PXYLP1Q8TE99 480 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms