RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PTGER4P35408 488 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 KHKP50053 298 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 CLDN15P56746 228 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 CLDN18P56856 261 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 SQLEQ14534 574 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 MAPK11Q15759 364 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 MAPK14Q16539 360 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 GLYR1Q49A26 553 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 ACSF3Q4G176 576 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 TYW3Q6IPR3 259 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 SLC2A7Q6PXP3 512 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 FRRS1Q6ZNA5 592 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 MTERF4Q7Z6M4 381 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 ADGRE4PQ86SQ3 457 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 MISPQ8IVT2 679 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 PM20D2Q8IYS1 436 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 ROPN1LQ96C74 230 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 ZG16BQ96DA0 208 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 SPDL1Q96EA4 605 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 DTNBP1Q96EV8 351 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 AURKBQ96GD4 344 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 SFXN2Q96NB2 322 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 NPAS1Q99742 590 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 SIKE1Q9BRV8 207 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 PTGES2Q9H7Z7 377 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 RMND5AQ9H871 391 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 EXD2Q9NVH0 621 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 CCDC167Q9P0B6 97 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 MKLN1Q9UL63 735 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 RNF6Q9Y252 685 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 DTNAQ9Y4J8 743 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 HEATR5AQ86XA9 2040 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 UNC79Q9P2D8 2635 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 OR2M5A3KFT3 312 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 KIAA0513O60268 411 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 TNFRSF21O75509 655 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 UGT2B17O75795 530 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 KRT75O95678 551 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 HPGDP15428 266 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF708P17019 499 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 PSMA4P25789 261 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 GRNP28799 593 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 MDH1P40925 334 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 MAGEA8P43361 318 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 RNF144AP50876 292 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 TXNL4AP83876 142 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF117Q03924 483 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 GPR68Q15743 365 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 BCL2A1Q16548 175 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 AGKQ53H12 422 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 PAGE3Q5JUK9 113 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 PDZK1Q5T2W1 519 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 LRIF1Q5T3J3 769 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 CBLN3Q6UW01 205 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 C16orf62Q7Z3J2 963 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 CCDC71Q8IV32 467 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 MSRB3Q8IXL7 192 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ANKFN1Q8N957 763 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 OR5M1Q8NGP8 315 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 PNPT1Q8TCS8 783 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 PHOSPHO1Q8TCT1 267 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ZPLD1Q8TCW7 415 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 RND1Q92730 232 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF524Q96C55 264 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 SDCCAG3Q96C92 435 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 SH3YL1Q96HL8 342 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF317Q96PQ6 595 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 TUBA1CQ9BQE3 449 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 SLC38A1Q9H2H9 487 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 TPT1P8Q9HAU6 139 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 HHATLQ9HCP6 504 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 POLE3Q9NRF9 147 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 SLC25A37Q9NYZ2 338 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 SLAMF8Q9P0V8 285 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ICAM5Q9UMF0 924 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 CAMK2AQ9UQM7 478 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF337Q9Y3M9 751 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 PCDHB14Q9Y5E9 798 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 KLF2Q9Y5W3 355 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 ARHGAP21Q5T5U3 1957 aa13.81□□□□□ -0.2
SNRPA1-213ENST00000560856 PKDREJQ9NTG1 2253 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 ADGRG4Q8IZF6 3080 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 A0A096LPI6 279 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 TRBV5-3A0A0A0MS03 114 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 A0A0G2JND7 137 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 A0A0G2JNJ9 132 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 SERINC4A6NH21 518 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 CD8B2A6NJW9 211 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 SHISA8B8ZZ34 492 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 NR5A2O00482 541 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 GMFGO60234 142 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 CLDN14O95500 239 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 CHRM4P08173 479 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 LINGO3P0C6S8 592 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 CEACAM8P31997 349 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 PLAURQ03405 335 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 CHRNEQ04844 493 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 SYPL1Q16563 259 aa13.8□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF630Q2M218 657 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms