RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SQLEQ14534 574 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 GPAT3Q53EU6 434 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 NHSL2Q5HYW2 709 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 PDZK1Q5T2W1 519 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 C1orf185Q5T7R7 199 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 TYW3Q6IPR3 259 aaKnown RBP12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 SEM1Q6ZVN7 128 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 C16orf62Q7Z3J2 963 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 IFNEQ86WN2 208 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 TRIML2Q8N7C3 387 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 SDCCAG3Q96C92 435 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 SPDL1Q96EA4 605 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 C1GALT1C1Q96EU7 318 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 ITCHQ96J02 903 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 SFXN2Q96NB2 322 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 TTYH2Q9BSA4 534 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 QRSL1Q9H0R6 528 aaKnown RBP12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 ZNF385DQ9H6B1 395 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 RMND5AQ9H871 391 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 EXD2Q9NVH0 621 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 RNF6Q9Y252 685 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 CARD8Q9Y2G2 431 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 ZNF337Q9Y3M9 751 aa12.53□□□□□ -0.4
TSPAN3-205ENST00000558745 KIAA1549Q9HCM3 1950 aa12.52□□□□□ -0.4
TSPAN3-205ENST00000558745 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.4
TSPAN3-205ENST00000558745 IGLV3-32A0A0A0MS00 114 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 BCAS1O75363 584 aaPredicted RBP12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 STX11O75558 287 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 UGT2B17O75795 530 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 NUDT7P0C024 238 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 ETFAP13804 333 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 LCN1P31025 176 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 ADH7P40394 386 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 KHKP50053 298 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 LHX2P50458 406 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 ATP4BP51164 291 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 ARFIP2P53365 341 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 ZNF117Q03924 483 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 MAPK11Q15759 364 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 B3GNT6Q6ZMB0 384 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 MAMDC2Q7Z304 686 aaPredicted RBP12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 MSRB3Q8IXL7 192 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 OR10Q1Q8NGQ4 319 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 UCK2Q9BZX2 261 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 ZNF350Q9GZX5 532 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 PTGES2Q9H7Z7 377 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 TPT1P8Q9HAU6 139 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 SLC25A37Q9NYZ2 338 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 DTNAQ9Y4J8 743 aa12.52□□□□□ -0.41
TSPAN3-205ENST00000558745 A0A0G2JNJ9 132 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 A0A1W2PQD3 144 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 OR2M5A3KFT3 312 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 CLDN24A6NM45 220 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 FIGNL2A6NMB9 653 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 GTPBP1O00178 669 aaKnown RBP12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 HCRTR2O43614 444 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 WDR1O75083 606 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 CYP7B1O75881 506 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 TOXO94900 526 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 SOX30O94993 753 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 H6PDO95479 791 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 KRT75O95678 551 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 ACTL6AO96019 429 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 CHRM4P08173 479 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 HOXB9P17482 250 aaPredicted RBP12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 IL11P20809 199 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 CRATP43155 626 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 SMSP52788 366 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 SUCLG1P53597 346 aaKnown RBP12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 CLDN15P56746 228 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 LRRC74AQ0VAA2 488 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 RCAN2Q14206 197 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 TOMM34Q15785 309 aaPredicted RBP12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 ATAD3BQ5T9A4 648 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 RAET1LQ5VY80 246 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 TMEM211Q6ICI0 200 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 FRRS1Q6ZNA5 592 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 MSANTD1Q6ZTZ1 278 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 LIX1LQ8IVB5 337 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 UBQLNLQ8IYU4 475 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 C10orf111Q8N326 155 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 TNIP2Q8NFZ5 429 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 B4GALNT2Q8NHY0 566 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 POC1BQ8TC44 478 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 PHF10Q8WUB8 498 aaKnown RBP12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 TRIB1Q96RU8 372 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 TUBA1CQ9BQE3 449 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 TRIM8Q9BZR9 551 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 HOXD1Q9GZZ0 328 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 CCDC134Q9H6E4 229 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 RUBCNLQ9H714 662 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 Q9UFV3 132 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 MRPS18CQ9Y3D5 142 aaKnown RBP12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 WDR45Q9Y484 360 aa12.51□□□□□ -0.41
TSPAN3-205ENST00000558745 A0A096LPI6 279 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms