RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 GATSQ8NAP1 163 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 OR6Y1Q8NGX8 325 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 OSTF1Q92882 214 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 C16orf58Q96GQ5 468 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 RNF145Q96MT1 663 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 ACTR6Q9GZN1 396 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 REEP4Q9H6H4 257 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 LRTM1Q9HBL6 345 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 UBQLN4Q9NRR5 601 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 OXSMQ9NWU1 459 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 C1orf109Q9NX04 203 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 PTGDR2Q9Y5Y4 395 aa14.24□□□□□ -0.13
SCFD1-224ENST00000557713 UQCRHLA0A096LP55 91 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 A0A1W2PQD3 144 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 PLIN3O60664 434 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 LINGO3P0C6S8 592 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 SDC1P18827 310 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 AGTR1P30556 359 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 ZNF41P51814 821 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-224ENST00000557713 MANFP55145 182 aaKnown RBP14.23□□□□□ -0.13
SCFD1-224ENST00000557713 PDE7AQ13946 482 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 CCDC153Q494R4 210 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 CFAP157Q5JU67 520 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 HBMQ6B0K9 141 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 CLEC6AQ6EIG7 209 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 GTF2IRD2BQ6EKJ0 949 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 ZCCHC12Q6PEW1 402 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 GTF2IRD2Q86UP8 949 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 STK32CQ86UX6 486 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 TRABD2AQ86V40 505 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 MISPQ8IVT2 679 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 IFT20Q8IY31 132 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 OR2T11Q8NH01 316 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 LILRB1Q8NHL6 650 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-224ENST00000557713 ZFP28Q8NHY6 868 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 FBXO30Q8TB52 745 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 ZBED6CLQ96FA7 236 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-224ENST00000557713 SH3YL1Q96HL8 342 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-224ENST00000557713 CCT7Q99832 543 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 IQCGQ9H095 443 aaKnown RBP14.23□□□□□ -0.13
SCFD1-224ENST00000557713 CXorf56Q9H5V9 222 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 TMEM185BQ9H7F4 350 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 ACSS1Q9NUB1 689 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-224ENST00000557713 ADAM21Q9UKJ8 722 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 JMJD1CQ15652 2540 aa14.23□□□□□ -0.13
SCFD1-224ENST00000557713 RGS14O43566 566 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 AKAP10O43572 662 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 EFNA2O43921 213 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 SOX30O94993 753 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 TUBBP07437 444 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 CRHR1P34998 444 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 SERPINB4P48594 390 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 CARD18P57730 90 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 PPP2R2BQ00005 443 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 ZNF844Q08AG5 666 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 CD226Q15762 336 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 RFTN2Q52LD8 501 aaPredicted RBP14.22□□□□□ -0.13
SCFD1-224ENST00000557713 PDSS1Q5T2R2 415 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 ADAM5Q6NVV9 412 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 RNF165Q6ZSG1 346 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 LILRA2Q8N149 483 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 B4GALNT2Q8NHY0 566 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 ROBO4Q8WZ75 1007 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 AKAP1Q92667 903 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCFD1-224ENST00000557713 PPCDCQ96CD2 204 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 KLHL15Q96M94 604 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 MS4A4EQ96PG1 132 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 TSSK3Q96PN8 268 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 C12orf65Q9H3J6 166 aaKnown RBP14.22□□□□□ -0.13
SCFD1-224ENST00000557713 TUBB1Q9H4B7 451 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 C12orf49Q9H741 205 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 SH3BP4Q9P0V3 963 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 BAIAP2L1Q9UHR4 511 aa14.22□□□□□ -0.13
SCFD1-224ENST00000557713 SCDO00767 359 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 GCM2O75603 506 aaPredicted RBP14.21□□□□□ -0.13
SCFD1-224ENST00000557713 HSPA4LO95757 839 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 ALOX5P09917 674 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 CPA3P15088 417 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 HPGDP15428 266 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 ME2P23368 584 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 SHC1P29353 583 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 CCT5P48643 541 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 PRIM2P49643 509 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 ATP5J2P56134 94 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 KRTAP1-1Q07627 177 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 TNK1Q13470 666 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 ZNF239Q16600 458 aaKnown RBP14.21□□□□□ -0.13
SCFD1-224ENST00000557713 CCNJQ5T5M9 372 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 GABRG1Q8N1C3 465 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 STEAP2Q8NFT2 490 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 RAB3IL1Q8TBN0 382 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 RNF128Q8TEB7 428 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 S100PBPQ96BU1 408 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 MTERF3Q96E29 417 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 HDHD5Q9BXW7 423 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 LAMP3Q9UQV4 416 aa14.21□□□□□ -0.13
SCFD1-224ENST00000557713 ANK3Q12955 4377 aaKnown RBP14.2□□□□□ -0.14
SCFD1-224ENST00000557713 FBN3Q75N90 2809 aa14.2□□□□□ -0.14
SCFD1-224ENST00000557713 HIVEP2P31629 2446 aa14.2□□□□□ -0.14
SCFD1-224ENST00000557713 OVOL3O00110 214 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms