RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 TPK1Q9H3S4 243 aa11.64□□□□□ -0.55
SNRPF-203ENST00000551316 FKRPQ9H9S5 495 aa11.64□□□□□ -0.55
SNRPF-203ENST00000551316 WDR41Q9HAD4 459 aa11.64□□□□□ -0.55
SNRPF-203ENST00000551316 BCO1Q9HAY6 547 aa11.64□□□□□ -0.55
SNRPF-203ENST00000551316 SOX21Q9Y651 276 aaPredicted RBP11.64□□□□□ -0.55
SNRPF-203ENST00000551316 TRAV20A0A0B4J274 112 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 C3orf80F5H4A9 247 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 AP3B1O00203 1094 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 BANF1O75531 89 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 IL33O95760 270 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 ITGA5P08648 1049 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 OR4A8P0C604 315 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 SAGP10523 405 aaPredicted RBP11.63□□□□□ -0.55
SNRPF-203ENST00000551316 GGT5P36269 586 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 VPS41P49754 854 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 CARD18P57730 90 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 IL1RL1Q01638 556 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 TBCCQ15814 346 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 FAM189A2Q15884 450 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 GABRA6Q16445 453 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 PAGE2BQ5JRK9 111 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 VHLLQ6RSH7 139 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 FRA10AC1Q70Z53 315 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 SLC44A2Q8IWA5 706 aaPredicted RBP11.63□□□□□ -0.55
SNRPF-203ENST00000551316 CALML6Q8TD86 181 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 UBASH3BQ8TF42 649 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 CNRIP1Q96F85 164 aaPredicted RBP11.63□□□□□ -0.55
SNRPF-203ENST00000551316 NAT10Q9H0A0 1025 aaKnown RBP11.63□□□□□ -0.55
SNRPF-203ENST00000551316 SEC61A2Q9H9S3 476 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 NTN4Q9HB63 628 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 PLAC1Q9HBJ0 212 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 CA10Q9NS85 328 aa11.63□□□□□ -0.55
SNRPF-203ENST00000551316 A0A1W2PRB8 838 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 NDUFB5O43674 189 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 PRKD3O94806 890 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 NTF4P34130 210 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 GPC1P35052 558 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 KCNJ1P48048 391 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 KHKP50053 298 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 MANFP55145 182 aaKnown RBP11.62□□□□□ -0.55
SNRPF-203ENST00000551316 PSG6Q00889 435 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 RELBQ01201 579 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 LAPTM5Q13571 262 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 CRYMQ14894 314 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 SLC9A3R2Q15599 337 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 ZNHIT3Q15649 155 aaPredicted RBP11.62□□□□□ -0.55
SNRPF-203ENST00000551316 ELFN2Q5R3F8 820 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 SAMD5Q5TGI4 173 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 C9orf135Q5VTT2 229 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 UGT2A3Q6UWM9 527 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 SIGLEC10Q96LC7 697 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 CAPS2Q9BXY5 557 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 LACRTQ9GZZ8 138 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 RASSF4Q9H2L5 321 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 MED17Q9NVC6 651 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 GAR1Q9NY12 217 aaKnown RBP11.62□□□□□ -0.55
SNRPF-203ENST00000551316 ZNF69Q9UC07 566 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 PRODH2Q9UF12 536 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 MMP24Q9Y5R2 645 aa11.62□□□□□ -0.55
SNRPF-203ENST00000551316 SLC22A31A6NKX4 558 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 B9A039 149 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 SCAMP2O15127 329 aaKnown RBP11.61□□□□□ -0.55
SNRPF-203ENST00000551316 CCNT2O60583 730 aaKnown RBP11.61□□□□□ -0.55
SNRPF-203ENST00000551316 STK16O75716 305 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 TTC4O95801 387 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 ANGPTL1O95841 491 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 KNG1P01042 644 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 KRT20P35900 424 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 MAGEA3P43357 314 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 MAGEA6P43360 314 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 FOXF1Q12946 379 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 OR4D1Q15615 310 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 EFNB3Q15768 340 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 HIST2H2ACQ16777 129 aaPredicted RBP11.61□□□□□ -0.55
SNRPF-203ENST00000551316 ARL13AQ5H913 290 aaPredicted RBP11.61□□□□□ -0.55
SNRPF-203ENST00000551316 GTF2IRD2BQ6EKJ0 949 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 HIST2H2AA3Q6FI13 130 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 SLC48A1Q6P1K1 146 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 ADAMTSL2Q86TH1 951 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 GTF2IRD2Q86UP8 949 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 NUDT13Q86X67 352 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 CNTN4Q8IWV2 1026 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 CDK20Q8IZL9 346 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 LILRA2Q8N149 483 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 GATSQ8NAP1 163 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 CPNE4Q96A23 557 aaPredicted RBP11.61□□□□□ -0.55
SNRPF-203ENST00000551316 ZNF681Q96N22 645 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 RAB1BQ9H0U4 201 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 FAM120CQ9NX05 1096 aaKnown RBP11.61□□□□□ -0.55
SNRPF-203ENST00000551316 CTNNAL1Q9UBT7 734 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 ABCG2Q9UNQ0 655 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 VWA7Q9Y334 891 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 REXO2Q9Y3B8 237 aaKnown RBP11.61□□□□□ -0.55
SNRPF-203ENST00000551316 PCDHB14Q9Y5E9 798 aa11.61□□□□□ -0.55
SNRPF-203ENST00000551316 IGHV1-18A0A0C4DH31 117 aa11.6□□□□□ -0.55
SNRPF-203ENST00000551316 TMEM129A0AVI4 362 aa11.6□□□□□ -0.55
SNRPF-203ENST00000551316 CIB4A0PJX0 185 aa11.6□□□□□ -0.55
SNRPF-203ENST00000551316 PLPP2O43688 288 aa11.6□□□□□ -0.55
SNRPF-203ENST00000551316 TFP02787 698 aa11.6□□□□□ -0.55
SNRPF-203ENST00000551316 DDX5P17844 614 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms