RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 NEDD8Q15843 81 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 WDR88Q6ZMY6 472 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 NAXDQ8IW45 347 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 PRR22Q8IZ63 422 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 C12orf43Q96C57 262 aaKnown RBP10.24□□□□□ -0.77
CTCFL-212ENST00000539382 HRASLS5Q96KN8 279 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 SLC46A1Q96NT5 459 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 PITX2Q99697 317 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 TIMMDC1Q9NPL8 285 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 KLHL28Q9NXS3 571 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 PRODH2Q9UF12 536 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 TMCC3Q9ULS5 477 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 POFUT2Q9Y2G5 429 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 GMPPBQ9Y5P6 360 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 FAAHO00519 579 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 SOX14O95416 240 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 DRD5P21918 477 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 EEF1B2P24534 225 aaKnown RBP10.24□□□□□ -0.77
CTCFL-212ENST00000539382 RYKP34925 604 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 TARDBPQ13148 414 aaKnown RBP eCLIP10.24□□□□□ -0.77
CTCFL-212ENST00000539382 SMN1Q16637 294 aaKnown RBP10.24□□□□□ -0.77
CTCFL-212ENST00000539382 C6orf141Q5SZD1 244 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 MRPL14Q6P1L8 145 aaKnown RBP10.24□□□□□ -0.77
CTCFL-212ENST00000539382 APOOLQ6UXV4 268 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 C16orf47Q6ZP98 133 aaPredicted RBP10.24□□□□□ -0.77
CTCFL-212ENST00000539382 GDF7Q7Z4P5 450 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 ANKRD37Q7Z713 158 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 OR1N1Q8NGS0 311 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 DAZLQ92904 295 aaKnown RBP10.24□□□□□ -0.77
CTCFL-212ENST00000539382 DTNBP1Q96EV8 351 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 GAL3ST4Q96RP7 486 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 EDEM2Q9BV94 578 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 RASSF1Q9NS23 344 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 B3GALT1Q9Y5Z6 326 aa10.24□□□□□ -0.77
CTCFL-212ENST00000539382 EP300Q09472 2414 aaPredicted RBP10.24□□□□□ -0.77
CTCFL-212ENST00000539382 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 CPNE3O75131 537 aaKnown RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 DKK1O94907 266 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 SOX30O94993 753 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 LYPD3O95274 346 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 HEXBP07686 556 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 CDK4P11802 303 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 CHMP24386 653 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 CRHBPP24387 322 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ACAA2P42765 397 aaKnown RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 INSM1Q01101 510 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 IL5RAQ01344 420 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PTGES3Q15185 160 aaKnown RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ZNF141Q15928 474 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 SWI5Q1ZZU3 235 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 EIPR1Q53HC9 387 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ZNF773Q6PK81 442 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PLEKHM3Q6ZWE6 761 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PRICKLE2Q7Z3G6 844 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ENTHD1Q8IYW4 607 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PARP8Q8N3A8 854 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 APCDD1LQ8NCL9 501 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 NFAM1Q8NET5 270 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 OR14A16Q8NHC5 309 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 TMEM255BQ8WV15 326 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 C8orf44Q96CB5 159 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 SLC41A3Q96GZ6 507 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 KLHDC3Q9BQ90 382 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 WDR77Q9BQA1 342 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PRSS27Q9BQR3 290 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 RHNO1Q9BSD3 238 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 RTN4RQ9BZR6 473 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PARD6AQ9NPB6 346 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 FBXO8Q9NRD0 319 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PAK1IP1Q9NWT1 392 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 DNAJB12Q9NXW2 375 aaKnown RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 SLC7A7Q9UM01 511 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 C2orf92A0A1B0GVN3 265 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 A0A1W2PNU3 283 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 C4orf47A7E2U8 309 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 C17orf51A8MQB3 221 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ZNF701M0R085 212 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 AP3D1O14617 1153 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 XPNPEP2O43895 674 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ICMTO60725 284 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ALOX12BO75342 701 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 WBP4O75554 376 aaKnown RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 OXSR1O95747 527 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ADAP00813 363 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 GUSBP08236 651 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 FMO3P31513 532 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 CCKBRP32239 447 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ATP12AP54707 1039 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 SMIM11AP58511 58 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PIGFQ07326 219 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 OR1Q1Q15612 314 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 GPR107Q5VW38 600 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 SLCO6A1Q86UG4 719 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 APH1BQ8WW43 257 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 PMM1Q92871 262 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ZNF524Q96C55 264 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 LCORQ96JN0 433 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-212ENST00000539382 G6PC3Q9BUM1 346 aa10.23□□□□□ -0.77
CTCFL-212ENST00000539382 ULBP3Q9BZM4 244 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms